RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PARD3BQ8TEW8 1205 aa6.26□□□□□ -1.41
LTN1-206ENST00000486427 ZC3H10Q96K80 434 aaKnown RBP6.26□□□□□ -1.41
LTN1-206ENST00000486427 STARD7Q9NQZ5 370 aa6.26□□□□□ -1.41
LTN1-206ENST00000486427 PDGFCQ9NRA1 345 aa6.26□□□□□ -1.41
LTN1-206ENST00000486427 TNFRSF18Q9Y5U5 241 aa6.26□□□□□ -1.41
LTN1-206ENST00000486427 PPP6CO00743 305 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 KCNQ3O43525 872 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 CA12O43570 354 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 PRC1O43663 620 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 GCATO75600 419 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 CHRM5P08912 532 aaPredicted RBP6.25□□□□□ -1.41
LTN1-206ENST00000486427 PRR35P0CG20 571 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 ATF7P17544 494 aaPredicted RBP6.25□□□□□ -1.41
LTN1-206ENST00000486427 TM4SF4P48230 202 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 MTAPQ13126 283 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 CLCA4Q14CN2 919 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 SRSF7Q16629 238 aaKnown RBP eCLIP6.25□□□□□ -1.41
LTN1-206ENST00000486427 LONRF1Q17RB8 773 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 SUPT20HL1Q3ZLR7 823 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 KIAA1614Q5VZ46 1190 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 IL31Q6EBC2 164 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 GRHL2Q6ISB3 625 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 KIAA0408Q6ZU52 694 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 YTHDF3Q7Z739 585 aaKnown RBP6.25□□□□□ -1.41
LTN1-206ENST00000486427 FSTL5Q8N475 847 aaPredicted RBP6.25□□□□□ -1.41
LTN1-206ENST00000486427 SUN3Q8TAQ9 357 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 ADAMTS18Q8TE60 1221 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 EDC3Q96F86 508 aaKnown RBP6.25□□□□□ -1.41
LTN1-206ENST00000486427 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 GDF15Q99988 308 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 MAGEB5Q9BZ81 275 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 ARNT2Q9HBZ2 717 aa6.25□□□□□ -1.41
LTN1-206ENST00000486427 WDR91A4D1P6 747 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 UBE2Q2LH0YL09 131 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 NDST3O95803 873 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 TUBB4AP04350 444 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 HARSP12081 509 aaKnown RBP6.24□□□□□ -1.41
LTN1-206ENST00000486427 MYL4P12829 197 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 TNFSF4P23510 183 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 ADRA1DP25100 572 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 CERS1P27544 350 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 GABRB3P28472 473 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 SSBP2P81877 361 aaPredicted RBP6.24□□□□□ -1.41
LTN1-206ENST00000486427 ST3GAL2Q16842 350 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 CERKLQ49MI3 558 aaPredicted RBP6.24□□□□□ -1.41
LTN1-206ENST00000486427 FAM209BQ5JX69 171 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 RAP1GAP2Q684P5 730 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 DENND2CQ68D51 928 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 ABLIM2Q6H8Q1 611 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 BEND5Q7L4P6 421 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 NEK8Q86SG6 692 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 PRR11Q96HE9 360 aaPredicted RBP6.24□□□□□ -1.41
LTN1-206ENST00000486427 KAZALD1Q96I82 304 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 CCDC17Q96LX7 622 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 FYTTD1Q96QD9 318 aaKnown RBP6.24□□□□□ -1.41
LTN1-206ENST00000486427 SEMA4CQ9C0C4 833 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 ZBTB26Q9HCK0 441 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 MAN2B2Q9Y2E5 1009 aa6.24□□□□□ -1.41
LTN1-206ENST00000486427 RASA4BC9J798 803 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 BTBD19C9JJ37 291 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 RASA4O43374 803 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 PRAMEF2O60811 474 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 USP1O94782 785 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 WDR47O94967 919 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 KRT18P05783 430 aaKnown RBP6.23□□□□□ -1.41
LTN1-206ENST00000486427 TMEM225BP0DP42 221 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 SFPQP23246 707 aaKnown RBP eCLIP6.23□□□□□ -1.41
LTN1-206ENST00000486427 MST1P26927 711 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 NEK3P51956 506 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 GPC5P78333 572 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 LARS2Q15031 903 aaKnown RBP6.23□□□□□ -1.41
LTN1-206ENST00000486427 ACOX1Q15067 660 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 EZH2Q15910 746 aaKnown RBP6.23□□□□□ -1.41
LTN1-206ENST00000486427 MTX3Q5HYI7 312 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 ZNF626Q68DY1 528 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 SLC18B1Q6NT16 456 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 TMEM65Q6PI78 240 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 DCDC5Q6ZRR9 648 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 CCDC28AQ8IWP9 274 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 GALNT16Q8N428 558 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 C12orf76Q8N812 135 aaPredicted RBP6.23□□□□□ -1.41
LTN1-206ENST00000486427 PNPLA1Q8N8W4 532 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 PNISRQ8TF01 805 aaKnown RBP6.23□□□□□ -1.41
LTN1-206ENST00000486427 RIPOR3Q96MK2 946 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 EFHD1Q9BUP0 239 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 ZCWPW1Q9H0M4 648 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 FNIP2Q9P278 1114 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 PHTF1Q9UMS5 762 aa6.23□□□□□ -1.41
LTN1-206ENST00000486427 SMIM35A0A1B0GVV1 85 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 H3BNC9 293 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 NBPF7P0C2Y1 421 aaPredicted RBP6.22□□□□□ -1.41
LTN1-206ENST00000486427 KELP23276 732 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 PBX1P40424 430 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 CFHR3Q02985 330 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 GPS1Q13098 491 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 SEC23BQ15437 767 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 SLC35G1Q2M3R5 365 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 ARL13BQ3SXY8 428 aa6.22□□□□□ -1.41
LTN1-206ENST00000486427 FAXCQ5TGI0 409 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms