RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 RASAL2Q9UJF2 1139 aa13.55□□□□□ -0.24
CHMP3-208ENST00000486404 STRIP2Q9ULQ0 834 aa13.55□□□□□ -0.24
CHMP3-208ENST00000486404 SPAG17Q6Q759 2223 aa13.55□□□□□ -0.24
CHMP3-208ENST00000486404 EML5Q05BV3 1969 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 CHURC1-FNTBB4DL54 471 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 O00370 1275 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 MDM4O15151 490 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 TBX18O95935 607 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 ZBED1O96006 694 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 APODP05090 189 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 TDGF1P13385 188 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 FNTBP49356 437 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 SEC13P55735 322 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 GAD2Q05329 585 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 PDE4CQ08493 712 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 EFEMP1Q12805 493 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 STILQ15468 1287 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 ANO4Q32M45 955 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 LY6G5CQ5SRR4 150 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 KLHDC10Q6PID8 442 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 PRR23BQ6ZRT6 265 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 LONP2Q86WA8 852 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 ARHGEF19Q8IW93 802 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 EHBP1Q8NDI1 1231 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 NELL1Q92832 810 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 KAT5Q92993 513 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 UBXN6Q9BZV1 441 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 EPC1Q9H2F5 836 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 OSER1Q9NX31 292 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 CLIC5Q9NZA1 410 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 NUDT5Q9UKK9 219 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
CHMP3-208ENST00000486404 RALGAPA1Q6GYQ0 2036 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 LILRB5O75023 590 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 BRD2P25440 801 aaKnown RBP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 OPRD1P41143 372 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 EIF2DP41214 584 aaKnown RBP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 PLA2G4AP47712 749 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 YWHAGP61981 247 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 PREPLQ4J6C6 727 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 RAB41Q5JT25 222 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 LCLAT1Q6UWP7 414 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 GBP6Q6ZN66 633 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 RUBCNQ92622 972 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 GOLGA1Q92805 767 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 FAM81BQ96LP2 452 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 PNKPQ96T60 521 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 KLF16Q9BXK1 252 aaPredicted RBP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 ULBP1Q9BZM6 244 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 FBRSL1Q9HCM7 1045 aaKnown RBP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 SPHK2Q9NRA0 654 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 GMEB2Q9UKD1 530 aa13.53□□□□□ -0.24
CHMP3-208ENST00000486404 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.53□□□□□ -0.24
CHMP3-208ENST00000486404 GVINP1Q7Z2Y8 2422 aa13.52□□□□□ -0.24
CHMP3-208ENST00000486404 NEDD8-MDP1E9PL57 170 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 K7ESF4 209 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 TULP2O00295 520 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 PES1O00541 588 aaKnown RBP13.52□□□□□ -0.25
CHMP3-208ENST00000486404 HOXC11O43248 304 aaPredicted RBP13.52□□□□□ -0.25
CHMP3-208ENST00000486404 KAT7O95251 611 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 HMBSP08397 361 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 LCP1P13796 627 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 MFAP3P55082 362 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 C2orf27AQ580R0 203 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 TRIM65Q6PJ69 517 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 RHBDF2Q6PJF5 856 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 CLEC17AQ6ZS10 378 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 NUDT18Q6ZVK8 323 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 CEP68Q76N32 757 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 ENOSF1Q7L5Y1 443 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.52□□□□□ -0.25
CHMP3-208ENST00000486404 SCD5Q86SK9 330 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 C12orf40Q86WS4 652 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 ADGRG2Q8IZP9 1017 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 RNF139Q8WU17 664 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 TFAP2BQ92481 460 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 HHIPQ96QV1 700 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 CRACR2AQ9BSW2 395 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 THAP9Q9H5L6 903 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
CHMP3-208ENST00000486404 OLA1Q9NTK5 396 aaKnown RBP13.52□□□□□ -0.25
CHMP3-208ENST00000486404 LMBRD1Q9NUN5 540 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 C2orf42Q9NWW7 574 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 MARCH2Q9P0N8 246 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 OTOGLQ3ZCN5 2332 aa13.52□□□□□ -0.25
CHMP3-208ENST00000486404 MED7O43513 233 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 PRKCSHP14314 528 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-208ENST00000486404 ERCC5P28715 1186 aaPredicted RBP13.51□□□□□ -0.25
CHMP3-208ENST00000486404 CNR2P34972 360 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 USP8P40818 1118 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 GRIA2P42262 883 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 RGS7P49802 495 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 ZNF132P52740 706 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 COG7P83436 770 aa13.51□□□□□ -0.25
CHMP3-208ENST00000486404 DMWDQ09019 674 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms