RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ARCQ7LC44 396 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 SCUBE3Q8IX30 993 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 ZDHHC14Q8IZN3 488 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 AENQ8WTP8 325 aaKnown RBP15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 RXFP2Q8WXD0 754 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 SLITRK1Q96PX8 696 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 HINFPQ9BQA5 517 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 ACBD6Q9BR61 282 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 MED10Q9BTT4 135 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 VN1R3Q9BXE9 311 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 COL25A1Q9BXS0 654 aaPredicted RBP15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 MARCH5Q9NX47 278 aa15.27■□□□□ 0.03
POLR2J3-204ENST00000486319 PTPRDP23468 1912 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 PLXNA4Q9HCM2 1894 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 TCRBV7S2A1N4TA0A589 114 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 F8W810 466 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 TMEM189-UBE2V1I3L0A0 370 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 MAP2K7O14733 419 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 TADA2AO75478 443 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 FAM200BP0CF97 657 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 TCF4P15884 667 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 TYMPP19971 482 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 PTPN7P35236 360 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 COILP38432 576 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 SLC25A11Q02978 314 aaKnown RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 CD300LGQ6UXG3 332 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 SLC26A9Q7LBE3 791 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 THEM5Q8N1Q8 247 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 CASKIN2Q8WXE0 1202 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 AUTS2Q8WXX7 1259 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 IFT81Q8WYA0 676 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 KCTD13Q8WZ19 329 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 RNF25Q96BH1 459 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 SUSD3Q96L08 255 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 CRTAC1Q9NQ79 661 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 FEZ2Q9UHY8 353 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 TIMM13Q9Y5L4 95 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 IRAK3Q9Y616 596 aa15.26■□□□□ 0.03
POLR2J3-204ENST00000486319 ZSCAN5CA6NGD5 496 aaPredicted RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 RRP9O43818 475 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 TBX10O75333 385 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 TJP3O95049 919 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 SOD2P04179 222 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 LCP1P13796 627 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 SDC4P31431 198 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 FLT3P36888 993 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 BRCC3P46736 316 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 CARSP49589 748 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 NNTQ13423 1086 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 CASP8Q14790 479 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 PUS10Q3MIT2 529 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 ATP13A4Q4VNC1 1196 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 TFDP3Q5H9I0 405 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 EFHC1Q5JVL4 640 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 KIAA0319Q5VV43 1072 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 PTCRAQ6ISU1 281 aaPredicted RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 SPOCD1Q6ZMY3 1216 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 PAQR9Q6ZVX9 377 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 TAS1R1Q7RTX1 841 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 PIGZQ86VD9 579 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 GSPT2Q8IYD1 628 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 ARFGAP1Q8N6T3 406 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 MYCBPAPQ8TBZ2 947 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 SEC14L1Q92503 715 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 PIWIL1Q96J94 861 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 B3GNT5Q9BYG0 378 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 ACBD3Q9H3P7 528 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 PLEKHA4Q9H4M7 779 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 MRPL17Q9NRX2 175 aaKnown RBP15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 OGFRQ9NZT2 677 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 ADAM28Q9UKQ2 775 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 USP18Q9UMW8 372 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 EFR3BQ9Y2G0 817 aa15.25■□□□□ 0.03
POLR2J3-204ENST00000486319 BRWD1Q9NSI6 2320 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 ESYT3A0FGR9 886 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 LRRD1A4D1F6 860 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 GABBR2O75899 941 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 SASH3O75995 380 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 GLP2RO95838 553 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 SRGAP2BP0DMP2 458 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 MIPP30301 263 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 GBP1P32455 592 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 PTGIRP43119 386 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 TNNT3P45378 269 aaPredicted RBP15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 DRG2P55039 364 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 MAPRE1Q15691 268 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 CCNG2Q16589 344 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 KIAA1841Q6NSI8 718 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 MFSD7Q6UXD7 560 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 CLEC20AQ6ZU45 233 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 FAM35AQ86V20 835 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 JAMLQ86YT9 394 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 CCDC105Q8IYK2 499 aa15.24■□□□□ 0.03
POLR2J3-204ENST00000486319 GRK7Q8WTQ7 553 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms