RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 NAGPAQ9UK23 515 aa20.57■□□□□ 0.88
SNX5-213ENST00000486039 SMG5Q9UPR3 1016 aaKnown RBP20.57■□□□□ 0.88
SNX5-213ENST00000486039 MYO16Q9Y6X6 1858 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 K7ESF4 209 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 XPO1O14980 1071 aaKnown RBP20.56■□□□□ 0.88
SNX5-213ENST00000486039 RNF40O75150 1001 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 PAPSS2O95340 614 aaPredicted RBP20.56■□□□□ 0.88
SNX5-213ENST00000486039 CALCAP01258 141 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 PSEN1P49768 467 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 TKTL1P51854 596 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 SLC8A3P57103 927 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 BST2Q10589 180 aaKnown RBP20.56■□□□□ 0.88
SNX5-213ENST00000486039 LCLAT1Q6UWP7 414 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 ZNF276Q8N554 614 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 RBBP8NLQ8NC74 664 aaPredicted RBP20.56■□□□□ 0.88
SNX5-213ENST00000486039 GPT2Q8TD30 523 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 GBP4Q96PP9 640 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 DCHS1Q96JQ0 3298 aa20.56■□□□□ 0.88
SNX5-213ENST00000486039 SLC6A11P48066 632 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 ZNF132P52740 706 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 DMWDQ09019 674 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 C10orf120Q5SQS8 335 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 HTR3DQ70Z44 454 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 NDRG1Q92597 394 aaKnown RBP20.55■□□□□ 0.88
SNX5-213ENST00000486039 SECISBP2LQ93073 1101 aaKnown RBP20.55■□□□□ 0.88
SNX5-213ENST00000486039 EXOC4Q96A65 974 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 OTUB2Q96DC9 234 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 IPO9Q96P70 1041 aaKnown RBP20.55■□□□□ 0.88
SNX5-213ENST00000486039 CRACR2AQ9BSW2 395 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 ULBP1Q9BZM6 244 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 CLIC5Q9NZA1 410 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 DNMT3LQ9UJW3 386 aa20.55■□□□□ 0.88
SNX5-213ENST00000486039 GPR179Q6PRD1 2367 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 RALAP11233 206 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 BRD2P25440 801 aaKnown RBP20.54■□□□□ 0.88
SNX5-213ENST00000486039 ERCC5P28715 1186 aaPredicted RBP20.54■□□□□ 0.88
SNX5-213ENST00000486039 PLA2G4AP47712 749 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 CNGA2Q16280 664 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 TPD52L1Q16890 204 aaPredicted RBP20.54■□□□□ 0.88
SNX5-213ENST00000486039 FBXO43Q4G163 708 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 LY6G5CQ5SRR4 150 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 PM20D1Q6GTS8 502 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 BHLHA9Q7RTU4 235 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 C12orf40Q86WS4 652 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 GPR161Q8N6U8 529 aaKnown RBP20.54■□□□□ 0.88
SNX5-213ENST00000486039 THAP9Q9H5L6 903 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 UBE2TQ9NPD8 197 aaPredicted RBP20.54■□□□□ 0.88
SNX5-213ENST00000486039 POLR3BQ9NW08 1133 aaPredicted RBP20.54■□□□□ 0.88
SNX5-213ENST00000486039 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.54■□□□□ 0.88
SNX5-213ENST00000486039 CNTN6Q9UQ52 1028 aa20.54■□□□□ 0.88
SNX5-213ENST00000486039 DMXL1Q9Y485 3027 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 ANTXRLA6NF34 631 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 CHURC1-FNTBB4DL54 471 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 GABBR2O75899 941 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 ZBED1O96006 694 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 ADH1CP00326 375 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 SETSIPP0DME0 302 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 ADH5P11766 374 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 SLC9A1P19634 815 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 APBA1Q02410 837 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 MESP2Q0VG99 397 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 PUM1Q14671 1186 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX5-213ENST00000486039 GJB7Q6PEY0 223 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 TRIM65Q6PJ69 517 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 TADA2BQ86TJ2 420 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 SLC35F5Q8WV83 523 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 KCTD13Q8WZ19 329 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 LRRC4Q9HBW1 653 aa20.53■□□□□ 0.88
SNX5-213ENST00000486039 K7EQS6 105 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 ATG13O75143 517 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 MTIF2P46199 727 aaKnown RBP20.52■□□□□ 0.88
SNX5-213ENST00000486039 FNTBP49356 437 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 YWHAGP61981 247 aaKnown RBP eCLIP20.52■□□□□ 0.88
SNX5-213ENST00000486039 ADIGQ0VDE8 80 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 STILQ15468 1287 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 PMF1Q6P1K2 205 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 TMEM25Q86YD3 366 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 MIB1Q86YT6 1006 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 ARHGAP18Q8N392 663 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 RPLP0P6Q8NHW5 317 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 CDK5RAP1Q96SZ6 601 aaKnown RBP20.52■□□□□ 0.88
SNX5-213ENST00000486039 SPHK2Q9NRA0 654 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 DLL3Q9NYJ7 618 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 DACH1Q9UI36 760 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 RASAL2Q9UJF2 1139 aa20.52■□□□□ 0.88
SNX5-213ENST00000486039 M0QYV0 167 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 STC2O76061 302 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 EIF2DP41214 584 aaKnown RBP20.51■□□□□ 0.87
SNX5-213ENST00000486039 RGS7P49802 495 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 GAD2Q05329 585 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 GOLGA8FQ08AF8 430 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 GOLGA8DPQ0D2H9 430 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 EFEMP1Q12805 493 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 EXOC3L4Q17RC7 722 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 GBP6Q6ZN66 633 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 Q6ZNB5 142 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 RBM43Q6ZSC3 357 aaKnown RBP20.51■□□□□ 0.87
SNX5-213ENST00000486039 DGLUCYQ7Z3D6 616 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 SFTPA1Q8IWL2 248 aa20.51■□□□□ 0.87
SNX5-213ENST00000486039 PNKPQ96T60 521 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms