RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 TRMT2BQ96GJ1 504 aaKnown RBP10.47□□□□□ -0.73
SND1-213ENST00000486037 MYRFLQ96LU7 910 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 TRIM9Q9C026 710 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 TRIM4Q9C037 500 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 MIR1-1HGQ9H1L0 117 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 PLEKHA5Q9HAU0 1116 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 GRPEL1Q9HAV7 217 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 KMT5AQ9NQR1 393 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 IGSF5Q9NSI5 407 aa10.47□□□□□ -0.73
SND1-213ENST00000486037 TEP1Q99973 2627 aaKnown RBP10.47□□□□□ -0.73
SND1-213ENST00000486037 A0A1B0GVT2 93 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 ANO9A1A5B4 782 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 E9PAM4 449 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 CYB561D2O14569 222 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 KCNK3O14649 394 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.73
SND1-213ENST00000486037 TNFSF14O43557 240 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 SLC28A2O43868 658 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 NDUFS2O75306 463 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 CER1O95813 267 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 MYL1P05976 194 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 CLTAP09496 248 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 ADH5P11766 374 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 MUTP22033 750 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 EIF2DP41214 584 aaKnown RBP10.46□□□□□ -0.73
SND1-213ENST00000486037 KCNB1Q14721 858 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 WDR45BQ5MNZ6 344 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 SYCP2LQ5T4T6 812 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 SCARA3Q6AZY7 606 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 CNNM4Q6P4Q7 775 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 ETFBKMTQ8IXQ9 262 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 SYT2Q8N9I0 419 aaPredicted RBP10.46□□□□□ -0.73
SND1-213ENST00000486037 IPO4Q8TEX9 1081 aaKnown RBP10.46□□□□□ -0.73
SND1-213ENST00000486037 GSDMAQ96QA5 445 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 RUSC1Q9BVN2 902 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 RNF38Q9H0F5 515 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 CBX8Q9HC52 389 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 SMPD4Q9NXE4 827 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 DNM3Q9UQ16 869 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 PCDHGB2Q9Y5G2 931 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 AK5Q9Y6K8 562 aa10.46□□□□□ -0.73
SND1-213ENST00000486037 MYLKQ15746 1914 aa10.46□□□□□ -0.74
SND1-213ENST00000486037 NPHP3-ACAD11A0A0J9YXS1 232 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 TBC1D3BA6NDS4 549 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 CAPN8A6NHC0 703 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 MEI4A8MW99 385 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 KCNJ18B7U540 433 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 ZNF217O75362 1048 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 ADRB2P07550 413 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 NCAM1P13591 858 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 ACAT1P24752 427 aaKnown RBP10.45□□□□□ -0.74
SND1-213ENST00000486037 USP46P62068 366 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 ASIC1P78348 528 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 AMPD3Q01432 767 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 PPP2R3AQ06190 1150 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 IQCB1Q15051 598 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 KMT5BQ4FZB7 885 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 ARSHQ5FYA8 562 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 LY6G5CQ5SRR4 150 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 C10orf76Q5T2E6 689 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 LAYNQ6UX15 382 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 DYMQ7RTS9 669 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 GPBP1Q86WP2 473 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 TMPRSS12Q86WS5 348 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 DCP1BQ8IZD4 617 aaKnown RBP10.45□□□□□ -0.74
SND1-213ENST00000486037 KCTD17Q8N5Z5 321 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 C1orf216Q8TAB5 229 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 TTC9Q92623 222 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 DNAJC19Q96DA6 116 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 TOE1Q96GM8 510 aaKnown RBP10.45□□□□□ -0.74
SND1-213ENST00000486037 MRGPRX1Q96LB2 322 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 PKMYT1Q99640 499 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 CPNE5Q9HCH3 593 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 UXTQ9UBK9 157 aaPredicted RBP10.45□□□□□ -0.74
SND1-213ENST00000486037 CPQQ9Y646 472 aa10.45□□□□□ -0.74
SND1-213ENST00000486037 WASH3PC4AMC7 463 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 BCAT2O15382 392 aaPredicted RBP10.44□□□□□ -0.74
SND1-213ENST00000486037 CLDN3O15551 220 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 BRINP1O60477 761 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 TULP3O75386 442 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 MAPTP10636 758 aaKnown RBP10.44□□□□□ -0.74
SND1-213ENST00000486037 C6P13671 934 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 CD44P16070 742 aaKnown RBP10.44□□□□□ -0.74
SND1-213ENST00000486037 CD6P30203 668 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 NTSR1P30989 418 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 MATR3P43243 847 aaKnown RBP eCLIP10.44□□□□□ -0.742e-6■■■□□ 18.5
SND1-213ENST00000486037 CSNK1EP49674 416 aaKnown RBP10.44□□□□□ -0.74
SND1-213ENST00000486037 ZNF165P49910 485 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 IL9RQ01113 521 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 KCNH2Q12809 1159 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 SMARCB1Q12824 385 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 TARDBPQ13148 414 aaKnown RBP eCLIP10.44□□□□□ -0.745e-7■■■■■ 26.9
SND1-213ENST00000486037 RTP5Q14D33 572 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 KIF19Q2TAC6 998 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 KCNT1Q5JUK3 1230 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 C6orf118Q5T5N4 469 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 ARHGAP40Q5TG30 622 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 DCAF12L1Q5VU92 463 aa10.44□□□□□ -0.74
SND1-213ENST00000486037 KIAA1324Q6UXG2 1013 aaKnown RBP10.44□□□□□ -0.74
SND1-213ENST00000486037 UNC13DQ70J99 1090 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms