RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 LPXNO60711 386 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 HSF2BPO75031 334 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 GRAP2O75791 330 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 FTCDO95954 541 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 C1RP00736 705 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 ATP1A1P05023 1023 aaKnown RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 ADH1AP07327 375 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 USP17L7P0C7H9 530 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 GPD1P21695 349 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 COMTP21964 271 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 TUFMP49411 452 aaKnown RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 PGFP49763 221 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 ZNF143P52747 638 aaPredicted RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 NAP1L1P55209 391 aaKnown RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 ITIH3Q06033 890 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 MTMR3Q13615 1198 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 PIGHQ14442 188 aaPredicted RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 BRD3Q15059 726 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 PDE12Q6L8Q7 609 aaKnown RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 DCUN1D2Q6PH85 259 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 DENND5BQ6ZUT9 1274 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 BEND5Q7L4P6 421 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 SCD5Q86SK9 330 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 DAAM2Q86T65 1068 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 SYCE1Q8N0S2 351 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 SLC22A17Q8WUG5 538 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 RXFP2Q8WXD0 754 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 RUBCNQ92622 972 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 NT5C3BQ969T7 300 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 HES6Q96HZ4 224 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 NECAB3Q96P71 396 aaPredicted RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 DDX23Q9BUQ8 820 aaKnown RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 LMAN2LQ9H0V9 348 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 CERS4Q9HA82 394 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 NMUR1Q9HB89 426 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 IP6K2Q9UHH9 426 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 LCMT1Q9UIC8 334 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
SND1-212ENST00000485871 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 HYOU1Q9Y4L1 999 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 INSL5Q9Y5Q6 135 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 NCOR1O75376 2440 aa11.85□□□□□ -0.51
SND1-212ENST00000485871 TMEM110-MUSTN1A8MSY1 372 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 SART1O43290 800 aaKnown RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 NCK2O43639 380 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 ERLIN1O75477 346 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 RTN3O95197 1032 aaPredicted RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 LTFP02788 710 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 ZDHHC11BP0C7U3 371 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 TCF4P15884 667 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 HMGA1P17096 107 aaKnown RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 TFE3P19532 575 aaPredicted RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 CTNNA2P26232 953 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 MATKP42679 507 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 SLC1A1P43005 524 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 PTPN9P43378 593 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CLCN4P51793 760 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 TAS2R40P59535 323 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 RNASE9P60153 205 aaKnown RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 YWHAZP63104 245 aaKnown RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 PITX1P78337 314 aaPredicted RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 AAK1Q2M2I8 961 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CCDC14Q49A88 953 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 RAB6CQ53S08 254 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 TEX35Q5T0J7 233 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 DAB2IPQ5VWQ8 1189 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 SYPL2Q5VXT5 272 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 TMCO3Q6UWJ1 677 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CYP4V2Q6ZWL3 525 aaPredicted RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 DEFB106AQ8N104 65 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 GPR152Q8TDT2 470 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 GDPD5Q8WTR4 605 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CENPIQ92674 756 aaPredicted RBP11.84□□□□□ -0.51
SND1-212ENST00000485871 MYRFLQ96LU7 910 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 NPY6RQ99463 290 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CNPY3Q9BT09 278 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 LRFN3Q9BTN0 628 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 EMILIN2Q9BXX0 1053 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 RAB6CQ9H0N0 254 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 FBXO44Q9H4M3 255 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 SLC28A3Q9HAS3 691 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CYP4F11Q9HBI6 524 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 OSER1Q9NX31 292 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CALCOCO1Q9P1Z2 691 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 C2orf16Q68DN1 1984 aa11.84□□□□□ -0.51
SND1-212ENST00000485871 CCDC151A5D8V7 595 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 ENC1O14682 589 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 CLASP2O75122 1294 aaKnown RBP11.83□□□□□ -0.52
SND1-212ENST00000485871 LRCH4O75427 683 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 ENDOD1O94919 500 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 IGLV3-25P01717 112 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 PDGFRAP16234 1089 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 PSMA2P25787 234 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 KLRC2P26717 231 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 YWHAQP27348 245 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 NOS2P35228 1153 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 MARCKSL1P49006 195 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 PEX5P50542 639 aa11.83□□□□□ -0.52
SND1-212ENST00000485871 EIF4EBP2Q13542 120 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms