RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 HOXA4Q00056 320 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 GBX1Q14549 363 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 CYP1B1Q16678 543 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 INSCQ1MX18 579 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 GFOD2Q3B7J2 385 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 PTCHD3Q3KNS1 767 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 PRAMEF17Q5VTA0 474 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 TRIM72Q6ZMU5 477 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 CHST15Q7LFX5 561 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 FAM156AQ8NDB6 213 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 CYP2W1Q8TAV3 490 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 RSPRY1Q96DX4 576 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 MACROD1Q9BQ69 325 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 C17orf80Q9BSJ5 609 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 THAP7Q9BT49 309 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 INO80BQ9C086 356 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 GBA2Q9HCG7 927 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 TBC1D30Q9Y2I9 924 aa5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 FNDC1Q4ZHG4 1894 aaPredicted RBP5.62□□□□□ -1.51
SMARCC1-207ENST00000485833 CEP350Q5VT06 3117 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 LOC102723971A0A1B0GUV8 181 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 DNAJC9-AS1A6NH13 148 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 TISP43B9A030 160 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 ZFYVE9O95405 1425 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 GLI3P10071 1580 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 BCAT1P54687 386 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 TUBA4AP68366 448 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 FAM193AP78312 1265 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 MST1RQ04912 1400 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 ARHGEF5Q12774 1597 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 CCNIQ14094 377 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 GRM3Q14832 879 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 EZH2Q15910 746 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 CACHD1Q5VU97 1274 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 DARS2Q6PI48 645 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 KIRREL2Q6UWL6 708 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 DPY19L3Q6ZPD9 716 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 GCC2Q8IWJ2 1684 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 VGLL2Q8N8G2 317 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 DNAJB14Q8TBM8 379 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 PTPRUQ92729 1446 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 TSR2Q969E8 191 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 DAZAP1Q96EP5 407 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 LENG8Q96PV6 779 aaPredicted RBP5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 SEMA4CQ9C0C4 833 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 DNMT3BQ9UBC3 853 aaKnown RBP5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 OGDHLQ9ULD0 1010 aa5.61□□□□□ -1.51
SMARCC1-207ENST00000485833 CAMTA1Q9Y6Y1 1673 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 ADAMTS13Q76LX8 1427 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 FRMPD2Q68DX3 1309 aaPredicted RBP5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 H7C1Q1 480 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 GOLIM4O00461 696 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 MGEA5O60502 916 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 SRGAP2O75044 1071 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 RASSF9O75901 435 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 PDE8BO95263 885 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 MYF5P13349 255 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 ZKSCAN1P17029 563 aaPredicted RBP5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 RPS16P62249 146 aaKnown RBP5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 E2F1Q01094 437 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 FMO1Q01740 532 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 IDI1Q13907 227 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 KIAA0753Q2KHM9 967 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 C3orf38Q5JPI3 329 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 L1TD1Q5T7N2 865 aaKnown RBP5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 PPP4R4Q6NUP7 873 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 ZNF66Q6ZN08 573 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 APIPQ96GX9 242 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 PRR25Q96S07 402 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 STK31Q9BXU1 1019 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 BHMT2Q9H2M3 363 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 COL20A1Q9P218 1284 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 NALCNQ8IZF0 1738 aa5.6□□□□□ -1.51
SMARCC1-207ENST00000485833 EHBP1L1Q8N3D4 1523 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 COL3A1P02461 1466 aaPredicted RBP5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 ARHGAP31Q2M1Z3 1444 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 UTRNP46939 3433 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 H7C4K7 107 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 PSMD9O00233 223 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 RASAL1O95294 804 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 YY1P25490 414 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 CERS1P27544 350 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 PEX2P28328 305 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 EPHA3P29320 983 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 PRKAR1BP31321 381 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 TERB1Q8NA31 727 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 TTC8Q8TAM2 541 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 SNX18Q96RF0 628 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 TRIM5Q9C035 493 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 DHX36Q9H2U1 1008 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 ZNF287Q9HBT7 754 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 PRDM11Q9NQV5 511 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 OBP2AQ9NY56 170 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 DRG1Q9Y295 367 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 MARF1Q9Y4F3 1742 aaKnown RBP5.59□□□□□ -1.51
SMARCC1-207ENST00000485833 BLMP54132 1417 aaPredicted RBP5.58□□□□□ -1.52
SMARCC1-207ENST00000485833 MTUS2Q5JR59 1369 aa5.58□□□□□ -1.52
SMARCC1-207ENST00000485833 XRN1Q8IZH2 1706 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms