RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 YWHAGP61981 247 aaKnown RBP eCLIP16.59■□□□□ 0.25
APOE-205ENST00000485628 OGDHQ02218 1023 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 ITIH3Q06033 890 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 ZNF252P-AS1Q0IIN9 211 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 SLC5A9Q2M3M2 681 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 PABPC1LQ4VXU2 614 aaKnown RBP16.59■□□□□ 0.25
APOE-205ENST00000485628 MSANTD2Q6P1R3 559 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 KLHDC10Q6PID8 442 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 PHLDB2Q86SQ0 1253 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 RHOT2Q8IXI1 618 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 ELMOD1Q8N336 334 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 ARHGAP18Q8N392 663 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 CENPIQ92674 756 aaPredicted RBP16.59■□□□□ 0.25
APOE-205ENST00000485628 SLITRK1Q96PX8 696 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 TRIM7Q9C029 511 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 SYNCQ9H7C4 482 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 POPDC2Q9HBU9 364 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 OSGEPQ9NPF4 335 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 TLR8Q9NR97 1041 aaKnown RBP16.59■□□□□ 0.25
APOE-205ENST00000485628 ABCC13Q9NSE7 274 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 SCINQ9Y6U3 715 aa16.59■□□□□ 0.25
APOE-205ENST00000485628 DPYSL4O14531 572 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 DAB1O75553 588 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 FGF19O95750 216 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 OAS1P00973 400 aaKnown RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 SRGAP2BP0DMP2 458 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 PFKLP17858 780 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 MATKP42679 507 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 FAM102AQ5T9C2 384 aaPredicted RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 OTUD1Q5VV17 481 aaPredicted RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 SYPL2Q5VXT5 272 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 TMC5Q6UXY8 1006 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 SMRP1Q8NCR6 262 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 SHKBP1Q8TBC3 707 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 SUSD6Q92537 303 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 SMG7Q92540 1137 aaKnown RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 PGAP3Q96FM1 320 aaPredicted RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 NPY6RQ99463 290 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 CORO1BQ9BR76 489 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 NUP85Q9BW27 656 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 MRPL47Q9HD33 250 aaKnown RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 ASAH2Q9NR71 780 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 METTL5Q9NRN9 209 aaKnown RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 MAGED2Q9UNF1 606 aaPredicted RBP16.58■□□□□ 0.24
APOE-205ENST00000485628 DENND4AQ7Z401 1863 aa16.58■□□□□ 0.24
APOE-205ENST00000485628 XIRP2A4UGR9 3374 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 DOCK8Q8NF50 2099 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 GOLGA8SH3BPF8 625 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 WEE1P30291 646 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 CDC25CP30307 473 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 NOS2P35228 1153 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 PTPN9P43378 593 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 CCDC14Q49A88 953 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 RARS2Q5T160 578 aaKnown RBP16.57■□□□□ 0.24
APOE-205ENST00000485628 GRASPQ7Z6J2 395 aaPredicted RBP16.57■□□□□ 0.24
APOE-205ENST00000485628 DEFB106AQ8N104 65 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 CCAR2Q8N163 923 aaKnown RBP16.57■□□□□ 0.24
APOE-205ENST00000485628 MICALL1Q8N3F8 863 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 ARFGAP1Q8N6T3 406 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 NIPA2Q8N8Q9 360 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 TCEAL4Q96EI5 215 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 CALR3Q96L12 384 aaKnown RBP16.57■□□□□ 0.24
APOE-205ENST00000485628 SELENOOQ9BVL4 669 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 WDR6Q9NNW5 1121 aaKnown RBP16.57■□□□□ 0.24
APOE-205ENST00000485628 CLDND1Q9NY35 253 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 TRPM5Q9NZQ8 1165 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 MYO1AQ9UBC5 1043 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 NAALADL1Q9UQQ1 740 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 ZKSCAN5Q9Y2L8 839 aa16.57■□□□□ 0.24
APOE-205ENST00000485628 GRAP2O75791 330 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 GABRR2P28476 465 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 ZNF143P52747 638 aaPredicted RBP16.56■□□□□ 0.24
APOE-205ENST00000485628 PITX1P78337 314 aaPredicted RBP16.56■□□□□ 0.24
APOE-205ENST00000485628 NTHL1P78549 312 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 KIF5AQ12840 1032 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 IFRD2Q12894 506 aaPredicted RBP16.56■□□□□ 0.24
APOE-205ENST00000485628 TXLNBQ8N3L3 684 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 RNF10Q8N5U6 811 aaKnown RBP16.56■□□□□ 0.24
APOE-205ENST00000485628 EMC1Q8N766 993 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
APOE-205ENST00000485628 RXFP2Q8WXD0 754 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 MCEEQ96PE7 176 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 TRIM62Q9BVG3 475 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 RRN3Q9NYV6 651 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.56■□□□□ 0.24
APOE-205ENST00000485628 CALCOCO1Q9P1Z2 691 aa16.56■□□□□ 0.24
APOE-205ENST00000485628 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
APOE-205ENST00000485628 CLUHO75153 1309 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 C2orf78A6NCI8 922 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 USP27XA6NNY8 438 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 ZNF197O14709 1029 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 RARGP13631 454 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 FOSL2P15408 326 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 PDGFRAP16234 1089 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 TFE3P19532 575 aaPredicted RBP16.55■□□□□ 0.24
APOE-205ENST00000485628 DDX6P26196 483 aaKnown RBP eCLIP16.55■□□□□ 0.24
APOE-205ENST00000485628 ACAP1Q15027 740 aa16.55■□□□□ 0.24
APOE-205ENST00000485628 TAF12Q16514 161 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms