RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 RASAL2Q9UJF2 1139 aa12.46□□□□□ -0.41
APTX-227ENST00000485479 NAALADL1Q9UQQ1 740 aa12.46□□□□□ -0.41
APTX-227ENST00000485479 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.46□□□□□ -0.41
APTX-227ENST00000485479 DPYSL4O14531 572 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 CYP1A1P04798 512 aaPredicted RBP12.45□□□□□ -0.42
APTX-227ENST00000485479 GPC5P78333 572 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 SYPL2Q5VXT5 272 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 TMEM110Q86TL2 294 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
APTX-227ENST00000485479 SYT11Q9BT88 431 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 ANP32EQ9BTT0 268 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 DAAM1Q9Y4D1 1078 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 TICRRQ7Z2Z1 1910 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 SYNJ2BP-COX16A0A087WUM0 186 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 MFAP3LO75121 409 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 FYNP06241 537 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 UNGP13051 313 aaPredicted RBP12.45□□□□□ -0.42
APTX-227ENST00000485479 ARID5BQ14865 1188 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 BTBD8Q5XKL5 378 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 WDR59Q6PJI9 974 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 ERICH1Q86X53 443 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 ZNF397Q8NF99 534 aaPredicted RBP12.45□□□□□ -0.42
APTX-227ENST00000485479 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.45□□□□□ -0.42
APTX-227ENST00000485479 ABHD10Q9NUJ1 306 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 COX16Q9P0S2 106 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 ARHGAP20Q9P2F6 1191 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 WNT6Q9Y6F9 365 aa12.45□□□□□ -0.42
APTX-227ENST00000485479 KIF26AQ9ULI4 1882 aaPredicted RBP12.45□□□□□ -0.42
APTX-227ENST00000485479 LEFTY2O00292 366 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.424e-13■□□□□ 9.3
APTX-227ENST00000485479 OLFM2O95897 454 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 LTFP02788 710 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 NCAM1P13591 858 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 TNFAIP3P21580 790 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 GDI1P31150 447 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 CDH5P33151 784 aaPredicted RBP12.44□□□□□ -0.42
APTX-227ENST00000485479 RPL34P49207 117 aaKnown RBP12.44□□□□□ -0.42
APTX-227ENST00000485479 CLEC16AQ2KHT3 1053 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 FAM102AQ5T9C2 384 aaPredicted RBP12.44□□□□□ -0.42
APTX-227ENST00000485479 OLFML1Q6UWY5 402 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 ZNF677Q86XU0 584 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 XYLT1Q86Y38 959 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 IPO4Q8TEX9 1081 aaKnown RBP12.44□□□□□ -0.42
APTX-227ENST00000485479 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 NOX5Q96PH1 765 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 CHP1Q99653 195 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 ADAMTS1Q9UHI8 967 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 MYO6Q9UM54 1294 aa12.44□□□□□ -0.42
APTX-227ENST00000485479 TFE3P19532 575 aaPredicted RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 ATP5C1P36542 298 aaKnown RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 ACADSBP45954 432 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 NSFP46459 744 aaKnown RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 TBX2Q13207 712 aaPredicted RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 MEA1Q16626 185 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 SNX30Q5VWJ9 437 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 MTSS1LQ765P7 747 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 EMC1Q8N766 993 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 STK32AQ8WU08 396 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 ELSPBP1Q96BH3 223 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 MRFAP1L1Q96HT8 127 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 ADAM33Q9BZ11 813 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 EDEM3Q9BZQ6 932 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 LINC00597Q9H2U6 94 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 EBF3Q9H4W6 596 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 COMMD8Q9NX08 183 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 GTSE1Q9NYZ3 720 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 ZFP37Q9Y6Q3 630 aaPredicted RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 MYOFQ9NZM1 2061 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 A0A087X0T9 212 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 OTOL1A6NHN0 477 aaPredicted RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 LSM8O95777 96 aaKnown RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 FAM228BP0C875 321 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 RALAP11233 206 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 ARSAP15289 507 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 PSMC3P17980 439 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 DDX6P26196 483 aaKnown RBP eCLIP12.43□□□□□ -0.42
APTX-227ENST00000485479 PRKCIP41743 596 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 SOX9P48436 509 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 PPP3CCP48454 512 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 CENPCQ03188 943 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 GFPT1Q06210 699 aaPredicted RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 TDGQ13569 410 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 ZNF77Q15935 545 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 DCAF6Q58WW2 860 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 TRNP1Q6NT89 227 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 TC2NQ8N9U0 490 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 BPIFB1Q8TDL5 484 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 C18orf8Q96DM3 657 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 DNAJC7Q99615 494 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
APTX-227ENST00000485479 MARCH2Q9P0N8 246 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 CALCOCO1Q9P1Z2 691 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 CA14Q9ULX7 337 aa12.43□□□□□ -0.42
APTX-227ENST00000485479 SORCS3Q9UPU3 1222 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms