RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ADAM7Q9H2U9 754 aa18.41■□□□□ 0.54
CHMP3-207ENST00000485465 POPDC2Q9HBU9 364 aa18.41■□□□□ 0.54
CHMP3-207ENST00000485465 ABCC13Q9NSE7 274 aa18.41■□□□□ 0.54
CHMP3-207ENST00000485465 CLIC5Q9NZA1 410 aa18.41■□□□□ 0.54
CHMP3-207ENST00000485465 CTTNBP2NLQ9P2B4 639 aa18.41■□□□□ 0.54
CHMP3-207ENST00000485465 UVRAGQ9P2Y5 699 aa18.41■□□□□ 0.54
CHMP3-207ENST00000485465 A0A0A6YYK5 440 aaPredicted RBP18.4■□□□□ 0.54
CHMP3-207ENST00000485465 TMEM191CA6NGB0 347 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 BTNL10A8MVZ5 291 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 DAB1O75553 588 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 ABL1P00519 1130 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 RFC1P35251 1148 aaPredicted RBP18.4■□□□□ 0.54
CHMP3-207ENST00000485465 DEKP35659 375 aaKnown RBP18.4■□□□□ 0.54
CHMP3-207ENST00000485465 CCR2P41597 374 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 RPL7AP62424 266 aaKnown RBP18.4■□□□□ 0.54
CHMP3-207ENST00000485465 ITIH3Q06033 890 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 DCUN1D2Q6PH85 259 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 ZNF662Q6ZS27 426 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 DEFB106AQ8N104 65 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 EMC1Q8N766 993 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 EDEM1Q92611 657 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 MCEEQ96PE7 176 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 GCNAQ96QF7 691 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.4■□□□□ 0.54
CHMP3-207ENST00000485465 COG5Q9UP83 839 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 DUSP10Q9Y6W6 482 aa18.4■□□□□ 0.54
CHMP3-207ENST00000485465 A0A1W2PRU2 124 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 ZNF197O14709 1029 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 CAPN9O14815 690 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 ZSCAN12O43309 604 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 RALAP11233 206 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 NCAM1P13591 858 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 RARGP13631 454 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 FLT3P36888 993 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 PRSS36Q5K4E3 855 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 CES5AQ6NT32 575 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 TRNP1Q6NT89 227 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 ZNF276Q8N554 614 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 SHKBP1Q8TBC3 707 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 ZNF564Q8TBZ8 553 aaPredicted RBP18.39■□□□□ 0.53
CHMP3-207ENST00000485465 TCEAL4Q96EI5 215 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 TSGA10Q9BZW7 698 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 ATXN3LQ9H3M9 355 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 OSGEPQ9NPF4 335 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.39■□□□□ 0.53
CHMP3-207ENST00000485465 NAALADL1Q9UQQ1 740 aa18.39■□□□□ 0.53
CHMP3-207ENST00000485465 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.38■□□□□ 0.53
CHMP3-207ENST00000485465 C2CD4BA6NLJ0 364 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 NRG2O14511 850 aaPredicted RBP18.38■□□□□ 0.53
CHMP3-207ENST00000485465 MOSPD3O75425 235 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 MTA2O94776 668 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 PDGFRAP16234 1089 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 GJA1P17302 382 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 NOS2P35228 1153 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 ARHGAP25P42331 645 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 MATKP42679 507 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 NOP2P46087 812 aaKnown RBP18.38■□□□□ 0.53
CHMP3-207ENST00000485465 TUBP50607 506 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 CYP4F8P98187 520 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 SLC5A9Q2M3M2 681 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 DCAF6Q58WW2 860 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 ATAT1Q5SQI0 421 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 HECTD3Q5T447 861 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 SYPL2Q5VXT5 272 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 RXFP2Q8WXD0 754 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 PPM1EQ8WY54 764 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 MRPS31Q92665 395 aaKnown RBP18.38■□□□□ 0.53
CHMP3-207ENST00000485465 DDX23Q9BUQ8 820 aaKnown RBP18.38■□□□□ 0.53
CHMP3-207ENST00000485465 TRIM7Q9C029 511 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 TRIM10Q9UDY6 481 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 SALL4Q9UJQ4 1053 aa18.38■□□□□ 0.53
CHMP3-207ENST00000485465 MYO16Q9Y6X6 1858 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 KRT86O43790 486 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 TLR5O60602 858 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 GPD1P21695 349 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 HADHBP55084 474 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 OGDHQ02218 1023 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 SKIV2LQ15477 1246 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 RSRC2Q7L4I2 434 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 REXO1L1PQ8IX06 675 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 FNIP1Q8TF40 1166 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 RNF139Q8WU17 664 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 CDK5RAP1Q96SZ6 601 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 CCSER2Q9H7U1 834 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 UBE2ZQ9H832 354 aaPredicted RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 WDR6Q9NNW5 1121 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 OLA1Q9NTK5 396 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 TRMT1Q9NXH9 659 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 CD207Q9UJ71 328 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 CDH22Q9UJ99 828 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 ANAPC7Q9UJX3 599 aa18.37■□□□□ 0.53
CHMP3-207ENST00000485465 MRPS23Q9Y3D9 190 aaKnown RBP18.37■□□□□ 0.53
CHMP3-207ENST00000485465 C2orf78A6NCI8 922 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 MYO1FO00160 1098 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 DPYSL4O14531 572 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 TBX18O95935 607 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 OAS1P00973 400 aaKnown RBP18.36■□□□□ 0.53
CHMP3-207ENST00000485465 FSHRP23945 695 aa18.36■□□□□ 0.53
CHMP3-207ENST00000485465 DDX6P26196 483 aaKnown RBP eCLIP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms