RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 CFHR3Q02985 330 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 HNRNPA0Q13151 305 aaKnown RBP5.86□□□□□ -1.47
CCDC66-219ENST00000484441 DAZAP2Q15038 168 aaPredicted RBP5.86□□□□□ -1.47
CCDC66-219ENST00000484441 SAFBQ15424 915 aaKnown RBP eCLIP5.86□□□□□ -1.47
CCDC66-219ENST00000484441 SUPT20HL1Q3ZLR7 823 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 SLC18B1Q6NT16 456 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 PNPLA1Q8N8W4 532 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 AS3MTQ9HBK9 375 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 MYO1AQ9UBC5 1043 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 MGAT4CQ9UBM8 478 aa5.86□□□□□ -1.47
CCDC66-219ENST00000484441 WDR17Q8IZU2 1322 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 WDR91A4D1P6 747 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 POM121BA6NF01 834 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 KPNA5O15131 536 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 CBFA2T3O75081 653 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 FGFR2P21802 821 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 ADRA1DP25100 572 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 LMO1P25800 156 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 PRIM2P49643 509 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 ZNF81P51508 661 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 DEUP1Q05D60 604 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 MTAPQ13126 283 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 MEX3CQ5U5Q3 659 aaKnown RBP5.85□□□□□ -1.47
CCDC66-219ENST00000484441 PAPD7Q5XG87 772 aaKnown RBP5.85□□□□□ -1.47
CCDC66-219ENST00000484441 ZNF425Q6IV72 752 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.85□□□□□ -1.47
CCDC66-219ENST00000484441 MAFAQ8NHW3 353 aaPredicted RBP5.85□□□□□ -1.47
CCDC66-219ENST00000484441 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.85□□□□□ -1.47
CCDC66-219ENST00000484441 WDR24Q96S15 920 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 SH2D3AQ9BRG2 576 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 PRSS22Q9GZN4 317 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 PDGFCQ9NRA1 345 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 TBC1D23Q9NUY8 699 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 ASAP1Q9ULH1 1129 aa5.85□□□□□ -1.47
CCDC66-219ENST00000484441 SMIM35A0A1B0GVV1 85 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 TMEM232C9JQI7 657 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 APAF1O14727 1248 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SNX2O60749 519 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 ARP10275 920 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SLC5A2P31639 672 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 TM4SF4P48230 202 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 COPB1P53618 953 aaKnown RBP5.84□□□□□ -1.47
CCDC66-219ENST00000484441 EIF4A1P60842 406 aaKnown RBP5.84□□□□□ -1.47
CCDC66-219ENST00000484441 ACOX1Q15067 660 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 COBLL1Q53SF7 1204 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 C11orf87Q6NUJ2 197 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 USP17L6PQ6QN14 398 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 C12orf76Q8N812 135 aaPredicted RBP5.84□□□□□ -1.47
CCDC66-219ENST00000484441 C11orf44Q8N8P7 122 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 PJA1Q8NG27 643 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SUN3Q8TAQ9 357 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SMG7Q92540 1137 aaKnown RBP5.84□□□□□ -1.47
CCDC66-219ENST00000484441 CCDC17Q96LX7 622 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SLC25A32Q9H2D1 315 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 NRIP3Q9NQ35 241 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 GEMIN8Q9NWZ8 242 aaKnown RBP5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SEMA5BQ9P283 1151 aa5.84□□□□□ -1.47
CCDC66-219ENST00000484441 SCAF8Q9UPN6 1271 aaKnown RBP5.84□□□□□ -1.47
CCDC66-219ENST00000484441 E5RJQ4 531 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 PMM2O15305 246 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 TP73O15350 636 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 GCATO75600 419 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 MYL4P12829 197 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 MST1P26927 711 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 GNALP38405 381 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 GPC5P78333 572 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 KLHDC7AQ5VTJ3 777 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 ABLIM2Q6H8Q1 611 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 GRHL2Q6ISB3 625 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 CLEC9AQ6UXN8 241 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 DCDC5Q6ZRR9 648 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 KIAA0408Q6ZU52 694 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 NGDNQ8NEJ9 315 aaKnown RBP5.83□□□□□ -1.48
CCDC66-219ENST00000484441 GDF15Q99988 308 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 NAA15Q9BXJ9 866 aaKnown RBP5.83□□□□□ -1.48
CCDC66-219ENST00000484441 SLC29A3Q9BZD2 475 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 ZBTB26Q9HCK0 441 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 TMEM8AQ9HCN3 771 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 FZD4Q9ULV1 537 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 FAM50BQ9Y247 325 aa5.83□□□□□ -1.48
CCDC66-219ENST00000484441 ANO9A1A5B4 782 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 OR2W5A6NFC9 320 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 WDR47O94967 919 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 ATICP31939 592 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 STT3AP46977 705 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 KRTAP10-11P60412 298 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 IFIT5Q13325 482 aaKnown RBP5.82□□□□□ -1.48
CCDC66-219ENST00000484441 KLF9Q13886 244 aaPredicted RBP5.82□□□□□ -1.48
CCDC66-219ENST00000484441 RRAGBQ5VZM2 374 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 TMEM65Q6PI78 240 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 BEND5Q7L4P6 421 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 C11orf96Q7Z7L8 435 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 LIX1LQ8IVB5 337 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 SCARB1Q8WTV0 552 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 RPL36ALQ969Q0 106 aaKnown RBP5.82□□□□□ -1.48
CCDC66-219ENST00000484441 VPS50Q96JG6 964 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 FAM118BQ9BPY3 351 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 EFHD1Q9BUP0 239 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 STARD7Q9NQZ5 370 aa5.82□□□□□ -1.48
CCDC66-219ENST00000484441 RNF7Q9UBF6 113 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms