RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 MMP17Q9ULZ9 603 aa20.26■□□□□ 0.83
NDUFA3-213ENST00000484103 SDK1Q7Z5N4 2213 aa20.26■□□□□ 0.83
NDUFA3-213ENST00000484103 FAM92AA1XBS5 289 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 SGK1O00141 431 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 LRP3O75074 770 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 HMBSP08397 361 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 ATP5C1P36542 298 aaKnown RBP20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 MPLP40238 635 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 LRMPQ12912 555 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 ELF2Q15723 593 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 EDRF1Q3B7T1 1238 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 CBWD6Q4V339 395 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 CBWD3Q5JTY5 395 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 CBWD5Q5RIA9 395 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 C10orf120Q5SQS8 335 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 ANKRD40Q6AI12 368 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 PGBD3Q8N328 593 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 IL17RCQ8NAC3 791 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 FBXL13Q8NEE6 735 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 SMARCE1Q969G3 411 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 SPHK2Q9NRA0 654 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 CISHQ9NSE2 258 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 RAB20Q9NX57 234 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 SCML2Q9UQR0 700 aa20.25■□□□□ 0.83
NDUFA3-213ENST00000484103 TULP3O75386 442 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 BCKDHBP21953 392 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 GRIA2P42262 883 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 CRY1Q16526 586 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 C10orf76Q5T2E6 689 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 ZNF658Q5TYW1 1059 aaPredicted RBP20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 CCDC26Q8TAB7 109 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 HMGB4Q8WW32 186 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 KLF16Q9BXK1 252 aaPredicted RBP20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 DNAJC17Q9NVM6 304 aaKnown RBP20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 DEC1Q9P2X7 70 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 RASAL2Q9UJF2 1139 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 PCDHA5Q9Y5H7 936 aa20.24■□□□□ 0.83
NDUFA3-213ENST00000484103 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 SMC2O95347 1197 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 GTF2H1P32780 548 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 MRPS21P82921 87 aaKnown RBP20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 GOLGA8FQ08AF8 430 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 GOLGA8DPQ0D2H9 430 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 USP39Q53GS9 565 aaKnown RBP20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 ARMCX6Q7L4S7 300 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 TMEM176AQ96HP8 235 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 BBS2Q9BXC9 721 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 DUSP16Q9BY84 665 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 DNAI2Q9GZS0 605 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 PLK2Q9NYY3 685 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 EBF1Q9UH73 591 aa20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 LSM7Q9UK45 103 aaKnown RBP20.23■□□□□ 0.83
NDUFA3-213ENST00000484103 TCRBV21S2A2A0A5A6 115 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 SLC30A4O14863 429 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 STX10O60499 249 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 RHOBTB1O94844 696 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 EIF2DP41214 584 aaKnown RBP20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 RAD23BP54727 409 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 PPM1JQ5JR12 505 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 IL31Q6EBC2 164 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 KLHL10Q6JEL2 608 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 SCD5Q86SK9 330 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 PHTF2Q8N3S3 785 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 FRMD1Q8N878 549 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 ZNF513Q8N8E2 541 aaPredicted RBP20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 SLC4A11Q8NBS3 891 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 OTUB2Q96DC9 234 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 LOXL4Q96JB6 756 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 CYLDQ9NQC7 956 aa20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.22■□□□□ 0.83
NDUFA3-213ENST00000484103 HOXC11O43248 304 aaPredicted RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 ADAM23O75077 832 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 ALDH1A2O94788 518 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 TYRP14679 529 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 KIR2DL1P43626 348 aaPredicted RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 DHPSP49366 369 aaPredicted RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 KIF11P52732 1056 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 EFEMP1Q12805 493 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 GOLGA7BQ2TAP0 167 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 EOGTQ5NDL2 527 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 GRAMD4Q6IC98 578 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 TOGARAM2Q6ZUX3 1019 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 ETFBKMTQ8IXQ9 262 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 KIAA1958Q8N8K9 716 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 ENGASEQ8NFI3 743 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 NDRG1Q92597 394 aaKnown RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 ZC3H10Q96K80 434 aaKnown RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 CNOT6LQ96LI5 555 aaKnown RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 GSDMAQ96QA5 445 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 POLMQ9NP87 494 aaPredicted RBP20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 DNMT3LQ9UJW3 386 aa20.21■□□□□ 0.83
NDUFA3-213ENST00000484103 GREM1O60565 184 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 ZNF806P0C7X5 589 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 CD19P15391 556 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 TNFRSF4P43489 277 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 NUCB2P80303 420 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 EGFLAMQ63HQ2 1017 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 HTR3DQ70Z44 454 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 RASSF3Q86WH2 238 aa20.2■□□□□ 0.82
NDUFA3-213ENST00000484103 DEFB119Q8N690 84 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms