RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 NR2E3Q9Y5X4 410 aa12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 ASTN2O75129 1339 aaPredicted RBP12.01□□□□□ -0.49
SEC61A1-205ENST00000483956 CAPN14A8MX76 684 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SPECC1L-ADORA2AF8WAN1 911 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 GOLGA8TH3BQL2 631 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DGKIO75912 1065 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 TNFAIP8O95379 198 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 PDAP1Q13442 181 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 CCNIQ14094 377 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 EFHC1Q5JVL4 640 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DHRS4L2Q6PKH6 230 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 TRIM72Q6ZMU5 477 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 C15orf39Q6ZRI6 1047 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 FASTKD5Q7L8L6 764 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 GSTA5Q7RTV2 222 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM160B2Q86V87 743 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 USP33Q8TEY7 942 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 AGO4Q9HCK5 861 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 GPRC5CQ9NQ84 441 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 C1orf112Q9NSG2 853 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DTNAQ9Y4J8 743 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 A0A088AWK7 358 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 THRAP10827 490 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 TKTP29401 623 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 SERPINB6P35237 376 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 RCVRNP35243 200 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 NR1H2P55055 460 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 RPL26P61254 145 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 SPP2Q13103 211 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ATP1A4Q13733 1029 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SEPT7Q16181 437 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 LDHDQ86WU2 507 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 CENPSQ8N2Z9 138 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ALLCQ8N6M5 410 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 NSMCE3Q96MG7 304 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ZNF696Q9H7X3 374 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 TBC1D23Q9NUY8 699 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SLC17A7Q9P2U7 560 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 PSMC3IPQ9P2W1 217 aaPredicted RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 SCINQ9Y6U3 715 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ALOX15BO15296 676 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DENRO43583 198 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 TRPA1O75762 1119 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SRGAP2CP0DJJ0 459 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SRGAP2BP0DMP2 458 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 RAG1P15918 1043 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 CDH3P22223 829 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SLC5A3P53794 718 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 MAMLD1Q13495 774 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DLGAP5Q15398 846 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DNAL1Q4LDG9 190 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ITPRIPL1Q6GPH6 555 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 PLEKHA7Q6IQ23 1121 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 PPP1R2P3Q6NXS1 205 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 SLC39A4Q6P5W5 647 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 KYAT3Q6YP21 454 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 WDR75Q8IWA0 830 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 SAMD3Q8N6K7 520 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ACER1Q8TDN7 264 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 CSRNP1Q96S65 589 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 FAM118BQ9BPY3 351 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 DBNDD1Q9H9R9 158 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 ANKEF1Q9NU02 776 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 PPARGC1AQ9UBK2 798 aaKnown RBP12□□□□□ -0.49
SEC61A1-205ENST00000483956 SHOC2Q9UQ13 582 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 UBIAD1Q9Y5Z9 338 aa12□□□□□ -0.49
SEC61A1-205ENST00000483956 COL11A2P13942 1736 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 A0A1W2PQ67 120 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 GOLGA8RI6L899 631 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 CALCAP01258 141 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 PHBP35232 272 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 NPTX2P47972 431 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 NFX1Q12986 1120 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 PSMD6Q15008 389 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 TKFCQ3LXA3 575 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 EFHC2Q5JST6 749 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 RABGAP1LQ5R372 815 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 OGFOD2Q6N063 350 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 LLGL2Q6P1M3 1020 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 PHF13Q86YI8 300 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 AHI1Q8N157 1196 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 CCDC124Q96CT7 223 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 DCUN1D1Q96GG9 259 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 BIRC8Q96P09 236 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 FHDC1Q9C0D6 1143 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 PAIP1Q9H074 479 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 TBC1D22BQ9NU19 505 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 DRG1Q9Y295 367 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 IVNS1ABPQ9Y6Y0 642 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 CRTAMO95727 393 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 CD58P19256 250 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 PTPN7P35236 360 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 CLDN10P78369 228 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 GHRHRQ02643 423 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 DMP1Q13316 513 aaPredicted RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 RAVER1Q8IY67 606 aaKnown RBP11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 RCOR2Q8IZ40 523 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 RAB3IL1Q8TBN0 382 aa11.99□□□□□ -0.49
SEC61A1-205ENST00000483956 TCP10LQ8TDR4 215 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms