RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TOGARAM2Q6ZUX3 1019 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 PHF13Q86YI8 300 aaPredicted RBP18.69■□□□□ 0.58
CPNE1-224ENST00000483359 CMTM8Q8IZV2 173 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 ARHGAP18Q8N392 663 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 IRGQQ8WZA9 623 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 SMPD4Q9NXE4 827 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 USTQ9Y2C2 406 aa18.69■□□□□ 0.58
CPNE1-224ENST00000483359 TRAV19A0A0A6YYK7 116 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 SSU72P8A0A1W2PR75 194 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 SART1O43290 800 aaKnown RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 GJB6O95452 261 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 FTLP02792 175 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 RALAP11233 206 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 BMP1P13497 986 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 PSEN1P49768 467 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 RNASE9P60153 205 aaKnown RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 SLC6A3Q01959 620 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 PTP4A2Q12974 167 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 MAPK8IP2Q13387 824 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 C10orf120Q5SQS8 335 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 SNX30Q5VWJ9 437 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 ARID3BQ8IVW6 561 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 SCML4Q8N228 414 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 ASB16Q96NS5 453 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 CCL26Q9Y258 94 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 MBL2P11226 248 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 NCAM1P13591 858 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 ABCB4P21439 1286 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 DDX6P26196 483 aaKnown RBP eCLIP18.68■□□□□ 0.589e-13■■■■□ 20.8
CPNE1-224ENST00000483359 VIPR2P41587 438 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 ASTE1Q2TB18 679 aaPredicted RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 CCDC122Q5T0U0 273 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 ALKBH5Q6P6C2 394 aaKnown RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 MIB1Q86YT6 1006 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 MCOLN2Q8IZK6 566 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 METTL5Q9NRN9 209 aaKnown RBP18.68■□□□□ 0.58
CPNE1-224ENST00000483359 ABCC13Q9NSE7 274 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 CLIC5Q9NZA1 410 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 RASAL2Q9UJF2 1139 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 NAALADL1Q9UQQ1 740 aa18.68■□□□□ 0.58
CPNE1-224ENST00000483359 SOWAHDA6NJG2 315 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 CAPN9O14815 690 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 RTN2O75298 545 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 CALB1P05937 261 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 GZMAP12544 262 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 RRM1P23921 792 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 TUBP50607 506 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 YWHAZP63104 245 aaKnown RBP18.67■□□□□ 0.58
CPNE1-224ENST00000483359 CDK17Q00537 523 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 ZP2Q05996 745 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 EFEMP1Q12805 493 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 SLC18A3Q16572 532 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 PARM1Q6UWI2 310 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 ZDHHC17Q8IUH5 632 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 ADHFE1Q8IWW8 467 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 RNF139Q8WU17 664 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 FGF14Q92915 247 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 SMARCD2Q92925 531 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 KXD1Q9BQD3 176 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 STRIP2Q9ULQ0 834 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 CPQQ9Y646 472 aa18.67■□□□□ 0.58
CPNE1-224ENST00000483359 NUP210Q8TEM1 1887 aaPredicted RBP18.67■□□□□ 0.58
CPNE1-224ENST00000483359 FYNP06241 537 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 EFHC1Q5JVL4 640 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 SYPL2Q5VXT5 272 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 RSAD2Q8WXG1 361 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 ZNF653Q96CK0 615 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 BAG1Q99933 345 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 POPDC2Q9HBU9 364 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 EPS15L1Q9UBC2 864 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 LIMD1Q9UGP4 676 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 SFMBT1Q9UHJ3 866 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 SCAMP3O14828 347 aaKnown RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 HSF2BPO75031 334 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 OLFM2O95897 454 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 ATP5C1P36542 298 aaKnown RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 ZXDBP98169 803 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 MTF1Q14872 753 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 SLC26A9Q7LBE3 791 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 EMC1Q8N766 993 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 ADAM32Q8TC27 787 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 USP13Q92995 863 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 NECAB3Q96P71 396 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 MYO1AQ9UBC5 1043 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 ZFP37Q9Y6Q3 630 aaPredicted RBP18.66■□□□□ 0.58
CPNE1-224ENST00000483359 NUMBLQ9Y6R0 609 aa18.66■□□□□ 0.58
CPNE1-224ENST00000483359 ASGR2P07307 311 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 IRF1P10914 325 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 FCARP24071 287 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 GSDMDP57764 484 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 ZNF268Q14587 947 aaPredicted RBP18.65■□□□□ 0.58
CPNE1-224ENST00000483359 DCAF6Q58WW2 860 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 TANGO2Q6ICL3 276 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 DNAJC24Q6P3W2 148 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 DEFB106AQ8N104 65 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 KHSRPQ92945 711 aaKnown RBP eCLIP18.65■□□□□ 0.588e-8■■■□□ 15.7
CPNE1-224ENST00000483359 RSPRY1Q96DX4 576 aa18.65■□□□□ 0.58
CPNE1-224ENST00000483359 RPP25Q9BUL9 199 aaKnown RBP18.65■□□□□ 0.58
CPNE1-224ENST00000483359 PACSIN1Q9BY11 444 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms