RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 PSG1P11464 419 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 BRAFP15056 766 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ZKSCAN1P17029 563 aaPredicted RBP3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 KLRC1P26715 233 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 NTSR1P30989 418 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 CBSP35520 551 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 GATMP50440 423 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 IGBP1P78318 339 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 STK3Q13188 491 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ARHGEF7Q14155 803 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 NPY5RQ15761 445 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ZNF750Q32MQ0 723 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ANO7Q6IWH7 933 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 DEF8Q6ZN54 512 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ANKRD13BQ86YJ7 626 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 KIAA0319LQ8IZA0 1049 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 C12orf76Q8N812 135 aaPredicted RBP3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 RUNDC1Q96C34 613 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 EDC3Q96F86 508 aaKnown RBP3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 KAZALD1Q96I82 304 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 SUCLG2Q96I99 432 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 ADGRE3Q9BY15 652 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 POT1Q9NUX5 634 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 GAR1Q9NY12 217 aaKnown RBP3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 RIMKLBQ9ULI2 386 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 SQORQ9Y6N5 450 aa3.76□□□□□ -1.81
LAPTM4A-202ENST00000483117 CNTNAP2Q9UHC6 1331 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 RAB27BO00194 218 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 FYB1O15117 783 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 MARCH6O60337 910 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 CNOT3O75175 753 aaKnown RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 PARP1P09874 1014 aaKnown RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 ANAPC15P60006 121 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 RPS16P62249 146 aaKnown RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 RPS13P62277 151 aaKnown RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 SRSF1Q07955 248 aaKnown RBP eCLIP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 MIDNQ504T8 468 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 USP49Q70CQ1 688 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 C16orf71Q8IYS4 520 aaPredicted RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 NMD3Q96D46 503 aaKnown RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 TMEM60Q9H2L4 133 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 USP29Q9HBJ7 922 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 TRIM36Q9NQ86 728 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 NKX1-2Q9UD57 310 aaPredicted RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 MID2Q9UJV3 735 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 NOB1Q9ULX3 412 aaKnown RBP3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 PAXBP1Q9Y5B6 917 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 HS3ST3B1Q9Y662 390 aa3.75□□□□□ -1.81
LAPTM4A-202ENST00000483117 ARID4BQ4LE39 1312 aaPredicted RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 A6NNZ2 444 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 PRPF3O43395 683 aaKnown RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 CA12O43570 354 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 OAZ2O95190 189 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 CRYABP02511 175 aaKnown RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 ACVR2AP27037 513 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 ME1P48163 572 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 THBS3P49746 956 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 HTR6P50406 440 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 CPT1AP50416 773 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 NANOS2P60321 138 aaKnown RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 GPC5P78333 572 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 SLC29A2Q14542 456 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 KCNAB1Q14722 419 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 CNGA2Q16280 664 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 SLC9C1Q4G0N8 1177 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 TMEM63BQ5T3F8 832 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 MEPCEQ7L2J0 689 aaKnown RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 PIM3Q86V86 326 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 RAVER1Q8IY67 606 aaKnown RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 ARFGAP1Q8N6T3 406 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 PNPLA1Q8N8W4 532 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 ZFYVE19Q96K21 471 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 MARK4Q96L34 752 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 COL20A1Q9P218 1284 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 AFF4Q9UHB7 1163 aaKnown RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 TPCN1Q9ULQ1 816 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 L1RE1Q9UN81 338 aa3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.74□□□□□ -1.81
LAPTM4A-202ENST00000483117 A8MVJ9 347 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 ISM1B1AKI9 464 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 FAM227AF5H4B4 570 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 PRAMEF2O60811 474 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 TOMM40O96008 361 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 IL1R1P14778 569 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 CD19P15391 556 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 TPH1P17752 444 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 ADRA1DP25100 572 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 TACR3P29371 465 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 CPA2P48052 419 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 EPHB1P54762 984 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 MTX1Q13505 466 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 STIM1Q13586 685 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 KPNB1Q14974 876 aaKnown RBP3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 PFKFB3Q16875 520 aaPredicted RBP3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 KIAA1161Q6NSJ0 714 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 CLEC9AQ6UXN8 241 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 C9orf47Q6ZRZ4 202 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 COLCA1Q6ZS62 124 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 ACRBPQ8NEB7 543 aa3.73□□□□□ -1.81
LAPTM4A-202ENST00000483117 NGDNQ8NEJ9 315 aaKnown RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms