RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 TBC1D17Q9HA65 648 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 NLRC4Q9NPP4 1024 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 ABCC13Q9NSE7 274 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 OLA1Q9NTK5 396 aaKnown RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 CFAP97Q9P2B7 532 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 MRPS17Q9Y2R5 130 aaKnown RBP17.41■□□□□ 0.38
HMGN1-214ENST00000482733 SH3BP1Q9Y3L3 701 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 PIAS3Q9Y6X2 628 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 PATJQ8NI35 1801 aa17.41■□□□□ 0.38
HMGN1-214ENST00000482733 KANSL1LA0AUZ9 987 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 E2F8A0AVK6 867 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 EPHB6O15197 1021 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 TBX18O95935 607 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 FANCCQ00597 558 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 AMPD2Q01433 879 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 PDCLQ13371 301 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 NR1I3Q14994 352 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 TPRG1Q6ZUI0 275 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 RSRC2Q7L4I2 434 aaKnown RBP17.4■□□□□ 0.38
HMGN1-214ENST00000482733 BHLHA9Q7RTU4 235 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 CACNA2D4Q7Z3S7 1137 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 TMEM110Q86TL2 294 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 CPA6Q8N4T0 437 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 ATP2A3Q93084 1043 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 ZFRQ96KR1 1074 aaKnown RBP17.4■□□□□ 0.38
HMGN1-214ENST00000482733 NAP1L5Q96NT1 182 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-214ENST00000482733 TRIM62Q9BVG3 475 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 KLF16Q9BXK1 252 aaPredicted RBP17.4■□□□□ 0.38
HMGN1-214ENST00000482733 TBC1D14Q9P2M4 693 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 STRIP2Q9ULQ0 834 aa17.4■□□□□ 0.38
HMGN1-214ENST00000482733 OBSL1O75147 1896 aa17.39■□□□□ 0.38
HMGN1-214ENST00000482733 DENND4CQ5VZ89 1909 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 YJEFN3A6XGL0 299 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 E7ENQ6 273 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 GABBR2O75899 941 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 GFPT2O94808 682 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 NFATC1O95644 943 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 CCDC172P0C7W6 258 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 AOC1P19801 751 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 COG7P83436 770 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 NR1H3Q13133 447 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 EML3Q32P44 896 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 IER5LQ5T953 404 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 BSPRYQ5W0U4 402 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 CWF19L1Q69YN2 538 aaKnown RBP17.39■□□□□ 0.37
HMGN1-214ENST00000482733 RALGPS2Q86X27 583 aaPredicted RBP17.39■□□□□ 0.37
HMGN1-214ENST00000482733 TMEM35BQ8NCS4 154 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 RNF139Q8WU17 664 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 OTUB2Q96DC9 234 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 PPP1R13BQ96KQ4 1090 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 OSBPL6Q9BZF3 934 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 MIS12Q9H081 205 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 HPS4Q9NQG7 708 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 GTSE1Q9NYZ3 720 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 LSM7Q9UK45 103 aaKnown RBP17.39■□□□□ 0.37
HMGN1-214ENST00000482733 MYO6Q9UM54 1294 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 WNT6Q9Y6F9 365 aa17.39■□□□□ 0.37
HMGN1-214ENST00000482733 PIK3R2O00459 728 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 LSM8O95777 96 aaKnown RBP17.38■□□□□ 0.37
HMGN1-214ENST00000482733 NUBP1P53384 320 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 UBASH3AP57075 661 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 ZNF445P59923 1031 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 TNK2Q07912 1038 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 EFEMP1Q12805 493 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 TRIM68Q6AZZ1 485 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 PASD1Q8IV76 773 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 WDTC1Q8N5D0 677 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 EPS8L1Q8TE68 723 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 IPO4Q8TEX9 1081 aaKnown RBP17.38■□□□□ 0.37
HMGN1-214ENST00000482733 DDX1Q92499 740 aaKnown RBP17.38■□□□□ 0.37
HMGN1-214ENST00000482733 FAM3CQ92520 227 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 NDRG1Q92597 394 aaKnown RBP17.38■□□□□ 0.37
HMGN1-214ENST00000482733 EXOC4Q96A65 974 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 LTB4R2Q9NPC1 389 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 MARCH2Q9P0N8 246 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 RASAL2Q9UJF2 1139 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 NUDT5Q9UKK9 219 aa17.38■□□□□ 0.37
HMGN1-214ENST00000482733 ZNF638Q14966 1978 aaKnown RBP17.38■□□□□ 0.37
HMGN1-214ENST00000482733 MYH10P35580 1976 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 E5RJQ4 531 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 SPECC1L-ADORA2AF8WAN1 911 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 NCAM2O15394 837 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 LTFP02788 710 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 TPM3P06753 285 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 ARSAP15289 507 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 AVPR2P30518 371 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 CDH5P33151 784 aaPredicted RBP17.37■□□□□ 0.37
HMGN1-214ENST00000482733 CDR2Q01850 454 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 HTR3DQ70Z44 454 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 BEND5Q7L4P6 421 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 NOP9Q86U38 636 aaKnown RBP17.37■□□□□ 0.37
HMGN1-214ENST00000482733 MIB1Q86YT6 1006 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 SCUBE3Q8IX30 993 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 C1orf131Q8NDD1 294 aaKnown RBP17.37■□□□□ 0.37
HMGN1-214ENST00000482733 EDEM3Q9BZQ6 932 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 LINC00597Q9H2U6 94 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 ECT2Q9H8V3 914 aa17.37■□□□□ 0.37
HMGN1-214ENST00000482733 ZNF510Q9Y2H8 683 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms