RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 PACSIN1Q9BY11 444 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 NACA2Q9H009 215 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 CCSER2Q9H7U1 834 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 CDH7Q9ULB5 785 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 PPP2R2CQ9Y2T4 447 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 PCDHA13Q9Y5I0 950 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 DENND4CQ5VZ89 1909 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 NCANO14594 1321 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 SART1O43290 800 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 GRAP2O75791 330 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 FTLP02792 175 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 RARGP13631 454 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 MAGEA1P43355 309 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 HECTD3Q5T447 861 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 OTOP3Q7RTS5 596 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 XYLT1Q86Y38 959 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 PHF13Q86YI8 300 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 TDRD5Q8NAT2 981 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 TTC16Q8NEE8 873 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 ATXN2LQ8WWM7 1075 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 ACSF2Q96CM8 615 aaPredicted RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 CYP2S1Q96SQ9 504 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 TASP1Q9H6P5 420 aa20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 LUC7LQ9NQ29 371 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-220ENST00000482645 TLR5O60602 858 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 RTN2O75298 545 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 LTFP02788 710 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 CKMP06732 381 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 ZDHHC11BP0C7U3 371 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 RALAP11233 206 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 ABCB4P21439 1286 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 GABRB2P47870 512 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 PSEN1P49768 467 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 RNASE9P60153 205 aaKnown RBP20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 TAF5Q15542 800 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 FAM102AQ5T9C2 384 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 BSPRYQ5W0U4 402 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 POTEHQ6S545 545 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 OLFML1Q6UWY5 402 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 MON1BQ7L1V2 547 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 RSRC2Q7L4I2 434 aaKnown RBP20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 SCML4Q8N228 414 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 C17orf53Q8N3J3 647 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 ARL14EPQ8N8R7 260 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 IRGQQ8WZA9 623 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 SLC22A12Q96S37 553 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 SLC46A2Q9BY10 475 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 SMG9Q9H0W8 520 aaKnown RBP20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 TFR2Q9UP52 801 aa20.87■□□□□ 0.93
TRAPPC12-220ENST00000482645 DOCK8Q8NF50 2099 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 TRAV19A0A0A6YYK7 116 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 C2CD4DB7Z1M9 353 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 TBX18O95935 607 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 CALB1P05937 261 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 GZMAP12544 262 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 AVPR1AP37288 418 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 VAV2P52735 878 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 SLC6A3Q01959 620 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 C10orf120Q5SQS8 335 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 ZDHHC17Q8IUH5 632 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 ZSCAN18Q8TBC5 510 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 GDE1Q9NZC3 331 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 STRIP2Q9ULQ0 834 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 NR2E1Q9Y466 385 aa20.86■□□□□ 0.93
TRAPPC12-220ENST00000482645 A0A0U1RQJ8 604 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 CAPN9O14815 690 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 ATMINO43313 823 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 COCHO43405 550 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 HDCP19113 662 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 DDX6P26196 483 aaKnown RBP eCLIP20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 C1QBPQ07021 282 aaKnown RBP20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 PTP4A2Q12974 167 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 C10orf76Q5T2E6 689 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 SNX30Q5VWJ9 437 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 PPP1R2P3Q6NXS1 205 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 MCOLN2Q8IZK6 566 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 RNF139Q8WU17 664 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 ATRIPQ8WXE1 791 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 ASB2Q96Q27 587 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 RNF38Q9H0F5 515 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 ABCC13Q9NSE7 274 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 TRMT1Q9NXH9 659 aaKnown RBP20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 VCANP13611 3396 aa20.85■□□□□ 0.93
TRAPPC12-220ENST00000482645 USP27XA6NNY8 438 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 MDM4O15151 490 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 ZSCAN12O43309 604 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 GJB6O95452 261 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 OAS1P00973 400 aaKnown RBP20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 H2AFZP0C0S5 128 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 MBL2P11226 248 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 LAMP2P13473 410 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 NCAM1P13591 858 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 YWHAZP63104 245 aaKnown RBP20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 FAM78AQ5JUQ0 283 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 EFHC1Q5JVL4 640 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 H2AFVQ71UI9 128 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 CMTM8Q8IZV2 173 aa20.84■□□□□ 0.93
TRAPPC12-220ENST00000482645 KIAA1524Q8TCG1 905 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms