RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 AP3B1O00203 1094 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CACNB4O00305 520 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 TXNL1O43396 289 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 THAP12O43422 761 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 ZBTB14O43829 449 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 MGEA5O60502 916 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TSPAN3O60637 253 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PLA2G6O60733 806 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PAHP00439 452 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 FTLP02792 175 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 AMY1AP04745 511 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 ITGB3P05106 788 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 THP07101 528 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 ADRB1P08588 477 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 SNRNP70P08621 437 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 NEFHP12036 1026 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TLX1P31314 330 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 HSPA1LP34931 641 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PTPN7P35236 360 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 FLT3LGP49771 235 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TKTL1P51854 596 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 RBM5P52756 815 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS41-212ENST00000482217 SEC24CP53992 1094 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CACNB3P54284 484 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 SLC26A5P58743 744 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 AP2B1P63010 937 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 DDR1Q08345 913 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 SLC20A2Q08357 652 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 FOXO1Q12778 655 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TFCP2Q12800 502 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TARDBPQ13148 414 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS41-212ENST00000482217 DUSP8Q13202 625 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 MTM1Q13496 603 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TRPC3Q13507 836 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PTK2BQ14289 1009 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 POLD3Q15054 466 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 ANO6Q4KMQ2 910 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CTXN3Q4LDR2 81 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 FAM47AQ5JRC9 791 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PRAMEF14Q5SWL7 426 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 MAP3K21Q5TCX8 1036 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PRRT2Q7Z6L0 340 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 TAX1BP1Q86VP1 789 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 HERC6Q8IVU3 1022 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 RPAP2Q8IXW5 612 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 CCAR2Q8N163 923 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 LRRC43Q8N309 656 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CCDC33Q8N5R6 958 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TTC9BQ8N6N2 239 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 SPC24Q8NBT2 197 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 C3orf20Q8ND61 904 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CEP70Q8NHQ1 597 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 STT3BQ8TCJ2 826 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CCHCR1Q8TD31 782 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 ST8SIA4Q92187 359 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 SHC3Q92529 594 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 RGMAQ96B86 450 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 NACC2Q96BF6 587 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 ZNF764Q96H86 408 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 TMX3Q96JJ7 454 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PPP1R13BQ96KQ4 1090 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 FAM167AQ96KS9 214 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TCEANC2Q96MN5 208 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TIGD1Q96MW7 591 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 RBM14Q96PK6 669 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 NEK1Q96PY6 1258 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 LRRC37BQ96QE4 947 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PPP1R9BQ96SB3 815 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 DMRTA2Q96SC8 542 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 CGRRF1Q99675 332 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 PYM1Q9BRP8 204 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 EDEM3Q9BZQ6 932 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 AGO3Q9H9G7 860 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 TCF7L2Q9NQB0 619 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 DECR2Q9NUI1 292 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 DDX18Q9NVP1 670 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 TMEM160Q9NX00 188 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 AIPL1Q9NZN9 384 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 DKK3Q9UBP4 350 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 SRP68Q9UHB9 627 aaKnown RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 RASAL2Q9UJF2 1139 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 FEM1BQ9UK73 627 aa4.46□□□□□ -1.7
VPS41-212ENST00000482217 AJAP1Q9UKB5 411 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 V9GYY5 206 aaPredicted RBP4.46□□□□□ -1.7
VPS41-212ENST00000482217 ATRNL1Q5VV63 1379 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 A0A0B4J269 797 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 KRT87PA6NCN2 255 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 NPEPPSL1A6NEC2 478 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 LRRC72A6NJI9 287 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 NT5C1B-RDH14C9J2C7 533 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 H0YC42 278 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 KIF2AO00139 706 aaPredicted RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 PJA2O43164 708 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 RIPK2O43353 540 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 HOXA3O43365 443 aaPredicted RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 IPO7O95373 1038 aaKnown RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 SCG2P13521 617 aa4.45□□□□□ -1.7
VPS41-212ENST00000482217 ALOX15P16050 662 aaPredicted RBP4.45□□□□□ -1.7
VPS41-212ENST00000482217 TMEM11P17152 192 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms