RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PM20D1Q6GTS8 502 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 TRIM65Q6PJ69 517 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 RHBDF2Q6PJF5 856 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 HTR3DQ70Z44 454 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 ENOSF1Q7L5Y1 443 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 IRF2BP1Q8IU81 584 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 BBS7Q8IWZ6 715 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 SIX6OS1Q8N1H7 587 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 KCTD13Q8WZ19 329 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 TFAP2BQ92481 460 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
HMGN1-213ENST00000482192 LSM7Q9UK45 103 aaKnown RBP12.49□□□□□ -0.41
HMGN1-213ENST00000482192 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
HMGN1-213ENST00000482192 MYO16Q9Y6X6 1858 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 CACNA1HO95180 2353 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 GTPBP10A4D1E9 387 aaKnown RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 K7ESF4 209 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 M0QYV0 167 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 RNF225M0QZC1 329 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 TULP2O00295 520 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 MDM4O15151 490 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 GREM1O60565 184 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 KRT5P13647 590 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 BRD2P25440 801 aaKnown RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 HOXA6P31267 233 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 MFAP3P55082 362 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 GAD2Q05329 585 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 ADIGQ0VDE8 80 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 CNGA2Q16280 664 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 LY6G5CQ5SRR4 150 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 BTBD8Q5XKL5 378 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 GBP6Q6ZN66 633 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 RSRC2Q7L4I2 434 aaKnown RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 MIB1Q86YT6 1006 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 GPT2Q8TD30 523 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 EZH1Q92800 747 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 SECISBP2LQ93073 1101 aaKnown RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 PNKPQ96T60 521 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 ZSWIM1Q9BR11 485 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 ULBP1Q9BZM6 244 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 UBE2TQ9NPD8 197 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-213ENST00000482192 SPHK2Q9NRA0 654 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 C2orf42Q9NWW7 574 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 NUDT5Q9UKK9 219 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 CNTN6Q9UQ52 1028 aa12.48□□□□□ -0.41
HMGN1-213ENST00000482192 HOXC11O43248 304 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-213ENST00000482192 COG7P83436 770 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 EFEMP1Q12805 493 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 MAN2A1Q16706 1144 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 EXOC3L4Q17RC7 722 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 ANO4Q32M45 955 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 PKN3Q6P5Z2 889 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 LONP2Q86WA8 852 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 SCML4Q8N228 414 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 SUMF1Q8NBK3 374 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 SLC35F5Q8WV83 523 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 WBP2Q969T9 261 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 ACDQ96AP0 544 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 CNGB3Q9NQW8 809 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 APEX2Q9UBZ4 518 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 RASAL2Q9UJF2 1139 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 STRIP2Q9ULQ0 834 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 SLC8A2Q9UPR5 921 aa12.47□□□□□ -0.41
HMGN1-213ENST00000482192 F5P12259 2224 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 K7EQS6 105 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 MED7O43513 233 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 STC2O76061 302 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 KAT7O95251 611 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 APODP05090 189 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 LCP1P13796 627 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 PRKCSHP14314 528 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-213ENST00000482192 SLC9A1P19634 815 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 CNR2P34972 360 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 SLC6A11P48066 632 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 FNTBP49356 437 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 DMWDQ09019 674 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 MEA1Q16626 185 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 PREPLQ4J6C6 727 aaPredicted RBP12.46□□□□□ -0.41
HMGN1-213ENST00000482192 VWA3BQ502W6 1294 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 RBM43Q6ZSC3 357 aaKnown RBP12.46□□□□□ -0.41
HMGN1-213ENST00000482192 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 BHLHA9Q7RTU4 235 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 C12orf40Q86WS4 652 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 TMEM25Q86YD3 366 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 CAMKK1Q8N5S9 505 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 RPLP0P6Q8NHW5 317 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 RNF139Q8WU17 664 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 RUBCNQ92622 972 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 TUBGCP2Q9BSJ2 902 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 NDST4Q9H3R1 872 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 OLA1Q9NTK5 396 aaKnown RBP12.46□□□□□ -0.41
HMGN1-213ENST00000482192 MARCH2Q9P0N8 246 aa12.46□□□□□ -0.41
HMGN1-213ENST00000482192 WDR35Q9P2L0 1181 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms