RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 TMEM25Q86YD3 366 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 SFTPA1Q8IWL2 248 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 ANKRD52Q8NB46 1076 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 CCDC150Q8NCX0 1101 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 TTC16Q8NEE8 873 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 OLIG1Q8TAK6 271 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 LMO3Q8TAP4 145 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 ERCC4Q92889 916 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 HEXIM2Q96MH2 286 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 TSG101Q99816 390 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 HINFPQ9BQA5 517 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 DNAI2Q9GZS0 605 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 METTL14Q9HCE5 456 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 SPHK2Q9NRA0 654 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 SEMA4GQ9NTN9 838 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 ARMCX3Q9UH62 379 aaPredicted RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 HOOK1Q9UJC3 728 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 MAN1B1Q9UKM7 699 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 HCN2Q9UL51 889 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 MMP17Q9ULZ9 603 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 STARD13Q9Y3M8 1113 aa10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 CNOT1A5YKK6 2376 aaKnown RBP10.25□□□□□ -0.77
TMEM39A-207ENST00000482162 MYO16Q9Y6X6 1858 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 TRIM49BA6NDI0 452 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 SCAMP3O14828 347 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CYP26A1O43174 497 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 TULP3O75386 442 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 HNRNPLP14866 589 aaKnown RBP eCLIP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CD58P19256 250 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 TRIM21P19474 475 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 ACO1P21399 889 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 DGKEP52429 567 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 ATXN1P54253 815 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CUL2Q13617 745 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 MORC3Q14149 939 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CRY1Q16526 586 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PLK5Q496M5 336 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PKDCCQ504Y2 493 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 C2orf27AQ580R0 203 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PRR23BQ6ZRT6 265 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 BHLHA9Q7RTU4 235 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PIGZQ86VD9 579 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 IL17RCQ8NAC3 791 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 P2RY11Q96G91 374 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CNOT6LQ96LI5 555 aaKnown RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 HHIPQ96QV1 700 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 DUSP15Q9H1R2 295 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CD248Q9HCU0 757 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 DNMT3LQ9UJW3 386 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 FBXO10Q9UK96 956 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 KIAA1257Q9ULG3 409 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 CIZ1Q9ULV3 898 aaPredicted RBP10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 SH3BP1Q9Y3L3 701 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 PCDHGA5Q9Y5G8 931 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 ABCA7Q8IZY2 2146 aa10.24□□□□□ -0.77
TMEM39A-207ENST00000482162 KIAA1549LQ6ZVL6 1849 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 EML5Q05BV3 1969 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 A0A1W2PQH9 124 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 PSMA7O14818 248 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 SLC30A4O14863 429 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 TM4SF5O14894 197 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 P4HA2O15460 535 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 CACNG3O60359 315 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 ADAM23O75077 832 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 GABBR2O75899 941 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 EPN2O95208 641 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 KLKB1P03952 638 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 APODP05090 189 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 CISD3P0C7P0 127 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 ZNF806P0C7X5 589 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 RARGP13631 454 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 FMO5P49326 533 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 LIMK1P53667 647 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 MARSP56192 900 aaKnown RBP10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 ZNF394Q53GI3 561 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 EMC10Q5UCC4 262 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 PRR23CQ6ZRP0 262 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 CEP68Q76N32 757 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 DGLUCYQ7Z3D6 616 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 TTC30AQ86WT1 665 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 SCML4Q8N228 414 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 RTKNQ9BST9 563 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 ARHGEF4Q9NR80 690 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
TMEM39A-207ENST00000482162 GON4LQ3T8J9 2241 aa10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 MED19A0JLT2 244 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 SGK1O00141 431 aa10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 O00370 1275 aa10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 GFRA2O00451 464 aa10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 XPO1O14980 1071 aaKnown RBP10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 GADD45BO75293 160 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 STC2O76061 302 aa10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 PENKP01210 267 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 TBXAS1P24557 533 aaPredicted RBP10.22□□□□□ -0.77
TMEM39A-207ENST00000482162 COG7P83436 770 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms