RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 Q6ZWC4 215 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 ZNF551Q7Z340 670 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-210ENST00000482158 GATAD2AQ86YP4 633 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 SUGP1Q8IWZ8 645 aaKnown RBP6.65□□□□□ -1.34
SF3B1-210ENST00000482158 FSTL5Q8N475 847 aaPredicted RBP6.65□□□□□ -1.34
SF3B1-210ENST00000482158 SPATA5Q8NB90 893 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 MYRIPQ8NFW9 859 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 ACTRT2Q8TDY3 377 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 TRAPPC12Q8WVT3 735 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 CCT6BQ92526 530 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 CAVIN3Q969G5 261 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 TBC1D20Q96BZ9 403 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 MLXIPQ9HAP2 919 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 STEAP1Q9UHE8 339 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 GPR52Q9Y2T5 361 aa6.65□□□□□ -1.34
SF3B1-210ENST00000482158 FNDC1Q4ZHG4 1894 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 LINC00473A8K010 186 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 FCHO1O14526 889 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 URI1O94763 535 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 PLA2G5P39877 138 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 E2F1Q01094 437 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 ABHD18Q0P651 414 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 ZNF169Q14929 603 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 C4orf46Q504U0 113 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 RP9Q8TA86 221 aaKnown RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 OTUD7AQ8TE49 926 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 NEU4Q8WWR8 484 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 LENG8Q96PV6 779 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 NUDT22Q9BRQ3 303 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 DUSP22Q9NRW4 184 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 NKX1-2Q9UD57 310 aaPredicted RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 HERC5Q9UII4 1024 aaKnown RBP6.64□□□□□ -1.35
SF3B1-210ENST00000482158 ASAP1Q9ULH1 1129 aa6.64□□□□□ -1.35
SF3B1-210ENST00000482158 A8MVJ9 347 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 H0YIZ8 118 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 AP4M1O00189 453 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 MGST3O14880 152 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 CREB3O43889 395 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 C6P13671 934 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 CD19P15391 556 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 POLR2AP24928 1970 aaKnown RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 PDE1AP54750 535 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 ALDH18A1P54886 795 aaKnown RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 EIF4A1P60842 406 aaKnown RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 DEUP1Q05D60 604 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 AASDHQ4L235 1098 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 TMEM196Q5HYL7 178 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 MSANTD2Q6P1R3 559 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 PIK3AP1Q6ZUJ8 805 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 PARS2Q7L3T8 475 aaKnown RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 RAB11FIP4Q86YS3 637 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 LRRC71Q8N4P6 559 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 SCAMP5Q8TAC9 235 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 THAP7Q9BT49 309 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 ISCA1Q9BUE6 129 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 DPCDQ9BVM2 203 aaPredicted RBP6.63□□□□□ -1.35
SF3B1-210ENST00000482158 PRDM8Q9NQV8 689 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 LRIT1Q9P2V4 623 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 HS3ST3A1Q9Y663 406 aa6.63□□□□□ -1.35
SF3B1-210ENST00000482158 PNMA6EA0A0J9YXQ4 647 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 M0R3H8 397 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 PSMD9O00233 223 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 KIAA0355O15063 1070 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 PRKCBP05771 671 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 CYP2C18P33260 490 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 RENBPP51606 427 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 TPTEP56180 551 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 SIM1P81133 766 aaPredicted RBP6.62□□□□□ -1.35
SF3B1-210ENST00000482158 PSG6Q00889 435 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 TRIM60Q495X7 471 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 PLAC9Q5JTB6 97 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A2PQ658T7 463 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 LAIR1Q6GTX8 287 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 RSC1A1Q92681 617 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 MCRS1Q96EZ8 462 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 PABPC3Q9H361 631 aaKnown RBP6.62□□□□□ -1.35
SF3B1-210ENST00000482158 TOR3AQ9H497 397 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 SRP68Q9UHB9 627 aaKnown RBP6.62□□□□□ -1.35
SF3B1-210ENST00000482158 ST3GAL5Q9UNP4 418 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 DGKBQ9Y6T7 804 aa6.62□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A18PA6NE21 464 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A16PA6NEW6 464 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A9PA6NNJ1 464 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A5PA8MXJ8 464 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 M0QZQ0 153 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FOXN1O15353 648 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 ACTL6BO94805 426 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 ITGA2BP08514 1039 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A15PP0C7V4 464 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 FAM90A14PP0C7W9 464 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 DHRS4L1P0CG22 281 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 TMEM225BP0DP42 221 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 ENGP17813 658 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 PROZP22891 400 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 KCNJ12Q14500 433 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 RINT1Q6NUQ1 792 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 WDR53Q7Z5U6 358 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-210ENST00000482158 LDLRAD3Q86YD5 345 aa6.61□□□□□ -1.35
SF3B1-210ENST00000482158 SLC44A2Q8IWA5 706 aaPredicted RBP6.61□□□□□ -1.35
SF3B1-210ENST00000482158 CLASRPQ8N2M8 674 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms