RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ZDHHC17Q8IUH5 632 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 CLEC4CQ8WTT0 213 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 SMG7Q92540 1137 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 NDRG1Q92597 394 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 TRMT2BQ96GJ1 504 aaKnown RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 SLITRK1Q96PX8 696 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 TTLL2Q9BWV7 592 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 HCFC1R1Q9NWW0 138 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 CLEC1BQ9P126 229 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 UXTQ9UBK9 157 aaPredicted RBP12.15□□□□□ -0.46
HPS4-212ENST00000481910 NENFQ9UMX5 172 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 SCML2Q9UQR0 700 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 PCDHGA4Q9Y5G9 962 aa12.15□□□□□ -0.46
HPS4-212ENST00000481910 ANKRD62A6NC57 917 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 TBX10O75333 385 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 H2AFZP0C0S5 128 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 MAGEA1P43355 309 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 GALCP54803 685 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 RWDD2BP57060 319 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 ZNF268Q14587 947 aaPredicted RBP12.14□□□□□ -0.47
HPS4-212ENST00000481910 COL19A1Q14993 1142 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 FAM183BPQ6ZVS7 135 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 H2AFVQ71UI9 128 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 GRASPQ7Z6J2 395 aaPredicted RBP12.14□□□□□ -0.47
HPS4-212ENST00000481910 XYLT1Q86Y38 959 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 SCML4Q8N228 414 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 CMASQ8NFW8 434 aaPredicted RBP12.14□□□□□ -0.47
HPS4-212ENST00000481910 FEZF2Q8TBJ5 459 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 ANKRD7Q92527 254 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 ZNF707Q96C28 371 aaPredicted RBP12.14□□□□□ -0.47
HPS4-212ENST00000481910 TRIM11Q96F44 468 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 POM121Q96HA1 1249 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 PACSIN1Q9BY11 444 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 THAP2Q9H0W7 228 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 KCNF1Q9H3M0 494 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 LUC7LQ9NQ29 371 aaKnown RBP12.14□□□□□ -0.47
HPS4-212ENST00000481910 ASAH2Q9NR71 780 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 WDR35Q9P2L0 1181 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 DNMT3BQ9UBC3 853 aaKnown RBP12.14□□□□□ -0.47
HPS4-212ENST00000481910 PCDHA13Q9Y5I0 950 aa12.14□□□□□ -0.47
HPS4-212ENST00000481910 FAM92AA1XBS5 289 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 GOLGA8SH3BPF8 625 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 SART1O43290 800 aaKnown RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 ABL1P00519 1130 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 MYBL1P10243 752 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 MYL4P12829 197 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 RRM1P23921 792 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 LTBRP36941 435 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 DAOAP59103 153 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 KRT83P78385 493 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 SLC6A3Q01959 620 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 PABPC1LQ4VXU2 614 aaKnown RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 AP1ARQ63HQ0 302 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 TOGARAM2Q6ZUX3 1019 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 MON1AQ86VX9 555 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 FAM149B1Q96BN6 582 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 ZNF653Q96CK0 615 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 PIWIL1Q96J94 861 aaKnown RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 DESI2Q9BSY9 194 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 ZNF334Q9HCZ1 680 aaPredicted RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 CNOT8Q9UFF9 292 aaKnown RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 MYO16Q9Y6X6 1858 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 YJEFN3A6XGL0 299 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 E7ENQ6 273 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 ATMINO43313 823 aaPredicted RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 RHOP08100 348 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 POU2F2P09086 479 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 GABRR2P28476 465 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 FLT3P36888 993 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 GPC5P78333 572 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 ITIH3Q06033 890 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 TAF5Q15542 800 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 EFHC1Q5JVL4 640 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 FAM102AQ5T9C2 384 aaPredicted RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 CES5AQ6NT32 575 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 OLFML1Q6UWY5 402 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 PDZD4Q76G19 769 aaPredicted RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 GPR149Q86SP6 731 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 TRIM74Q86UV6 250 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 TRIM73Q86UV7 250 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 PDZD8Q8NEN9 1154 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 CTNNBL1Q8WYA6 563 aaPredicted RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 IRGQQ8WZA9 623 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 LRRC3Q9BY71 257 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 TLR8Q9NR97 1041 aaKnown RBP12.13□□□□□ -0.47
HPS4-212ENST00000481910 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 TRPM5Q9NZQ8 1165 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 GMIPQ9P107 970 aa12.13□□□□□ -0.47
HPS4-212ENST00000481910 SZT2Q5T011 3432 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 A0A1W2PQH9 124 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 GRAP2O75791 330 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 PAPLNO95428 1278 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 F11P03951 625 aa12.12□□□□□ -0.47
HPS4-212ENST00000481910 KRT3P12035 628 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms