RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 TMEM161AQ9NX61 479 aa16.44■□□□□ 0.22
RXRA-202ENST00000481739 NOVA2Q9UNW9 492 aaKnown RBP16.44■□□□□ 0.22
RXRA-202ENST00000481739 ARHGEF37A1IGU5 675 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 CFAP69A5D8W1 941 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 CXCL10P02778 98 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 SHBGP04278 402 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 NPR3P17342 541 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 PTPN1P18031 435 aaKnown RBP16.43■□□□□ 0.22
RXRA-202ENST00000481739 CHKAP35790 457 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 MDH1P40925 334 aaKnown RBP16.43■□□□□ 0.22
RXRA-202ENST00000481739 GPS1Q13098 491 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 DPYSL3Q14195 570 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 KCTD19Q17RG1 926 aaPredicted RBP16.43■□□□□ 0.22
RXRA-202ENST00000481739 C15orf59Q2T9L4 293 aaPredicted RBP16.43■□□□□ 0.22
RXRA-202ENST00000481739 DNAJC21Q5F1R6 531 aaKnown RBP16.43■□□□□ 0.22
RXRA-202ENST00000481739 ABI1Q8IZP0 508 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 SENP8Q96LD8 212 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 RNF157Q96PX1 679 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 CCDC77Q9BR77 488 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 TMEM121Q9BTD3 319 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 DDX23Q9BUQ8 820 aaKnown RBP16.43■□□□□ 0.22
RXRA-202ENST00000481739 PPCSQ9HAB8 311 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 CALCOCO1Q9P1Z2 691 aa16.43■□□□□ 0.22
RXRA-202ENST00000481739 BCCIPQ9P287 314 aaKnown RBP eCLIP16.43■□□□□ 0.22
RXRA-202ENST00000481739 GRAP2O75791 330 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 ZFXP17010 805 aaPredicted RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 EN2P19622 333 aaPredicted RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 PCSK1P29120 753 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 MAGOHP61326 146 aaKnown RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 DYNLT1P63172 113 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 ATP11AP98196 1134 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 RNASELQ05823 741 aaKnown RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 TUSC3Q13454 348 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 NOMO1Q15155 1222 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 CDO1Q16878 200 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 NOMO2Q5JPE7 1267 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 CLLU1OSQ5K130 101 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 TAOK1Q7L7X3 1001 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 OSTM1Q86WC4 334 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 FUKQ8N0W3 1084 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 P3H4Q92791 437 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 FAF2Q96CS3 445 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 RBM15Q96T37 977 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■■■■ 33.2
RXRA-202ENST00000481739 ADAM7Q9H2U9 754 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■■■□ 20.7
RXRA-202ENST00000481739 SLC12A6Q9UHW9 1150 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 PIK3R2O00459 728 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 GABBR2O75899 941 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 FBXO21O94952 628 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 CD48P09326 243 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 HPDP32754 393 aaPredicted RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 ATP1A2P50993 1020 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 EIF3EP60228 445 aaKnown RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 STAT4Q14765 748 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 DPYSL2Q16555 572 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 TNFAIP8L3Q5GJ75 292 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 RNASEH2BQ5TBB1 312 aaKnown RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 WSCD1Q658N2 575 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 LRRC31Q6UY01 552 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 DSTYKQ6XUX3 929 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 HAUS1Q96CS2 278 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 UROC1Q96N76 676 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 FAM193BQ96PV7 902 aaPredicted RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 PAAF1Q9BRP4 392 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 ELAC1Q9H777 363 aaKnown RBP16.42■□□□□ 0.22
RXRA-202ENST00000481739 CDH9Q9ULB4 789 aa16.42■□□□□ 0.22
RXRA-202ENST00000481739 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.41■□□□□ 0.22
RXRA-202ENST00000481739 APOL1O14791 398 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 DAB1O75553 588 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 IFNB1P01574 187 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 FAM200BP0CF97 657 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 RBP3P10745 1247 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 RAG1P15918 1043 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 MATKP42679 507 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 HDAC4P56524 1084 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 ROR1Q01973 937 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 UPP1Q16831 310 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 ERMARDQ5T6L9 678 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 SLC9A4Q6AI14 798 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 SCYL2Q6P3W7 929 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 C4orf22Q6V702 233 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 CENPUQ71F23 418 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 PIGZQ86VD9 579 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 PPIL6Q8IXY8 311 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 RIBC1Q8N443 379 aaPredicted RBP16.41■□□□□ 0.22
RXRA-202ENST00000481739 SNRNP25Q9BV90 132 aaKnown RBP16.41■□□□□ 0.22
RXRA-202ENST00000481739 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 PCDH18Q9HCL0 1135 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 DDX43Q9NXZ2 648 aaKnown RBP16.41■□□□□ 0.22
RXRA-202ENST00000481739 NINJ2Q9NZG7 142 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 RCOR3Q9P2K3 495 aaPredicted RBP16.41■□□□□ 0.22
RXRA-202ENST00000481739 KANSL3Q9P2N6 904 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 DSEQ9UL01 958 aa16.41■□□□□ 0.22
RXRA-202ENST00000481739 TRIM43BA6NCK2 446 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 INPPL1O15357 1258 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 ACSL3O95573 720 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 TIMP1P01033 207 aa16.4■□□□□ 0.22
RXRA-202ENST00000481739 IGFBP6P24592 240 aaPredicted RBP16.4■□□□□ 0.22
RXRA-202ENST00000481739 TKTP29401 623 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms