RNA–Protein interactions for RNA: ENST00000481613.1

GGA1-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-219ENST00000481613 TIGD1Q96MW7 591 aa11.05□□□□□ -0.64
GGA1-219ENST00000481613 CDK5RAP1Q96SZ6 601 aaKnown RBP11.05□□□□□ -0.64
GGA1-219ENST00000481613 PNKPQ96T60 521 aa11.05□□□□□ -0.64
GGA1-219ENST00000481613 DUSP15Q9H1R2 295 aaPredicted RBP11.05□□□□□ -0.64
GGA1-219ENST00000481613 SMPD4Q9NXE4 827 aa11.05□□□□□ -0.64
GGA1-219ENST00000481613 SCML2Q9UQR0 700 aa11.05□□□□□ -0.64
GGA1-219ENST00000481613 PCDHGA5Q9Y5G8 931 aa11.05□□□□□ -0.64
GGA1-219ENST00000481613 ITPR1Q14643 2758 aa11.05□□□□□ -0.64
GGA1-219ENST00000481613 CACNA1EQ15878 2313 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ANTXRLA6NF34 631 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 K7EQS6 105 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 CDX4O14627 284 aaPredicted RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 TLR5O60602 858 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ALDH1A2O94788 518 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 RHOBTB1O94844 696 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 TRIM49P0CI25 452 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 TRIM49CP0CI26 452 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ADH5P11766 374 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ADORA2BP29275 332 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ATP5C1P36542 298 aaKnown RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 GRIA2P42262 883 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 TNFRSF4P43489 277 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 MXI1P50539 228 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 SLC8A3P57103 927 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 FKBP3Q00688 224 aaKnown RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 STIM1Q13586 685 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ELF2Q15723 593 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 PLK5Q496M5 336 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 NAIF1Q69YI7 327 aaPredicted RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 KLHDC10Q6PID8 442 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 LRSAM1Q6UWE0 723 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 CLEC20AQ6ZU45 233 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 HTR3DQ70Z44 454 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 ELOA2Q8IYF1 753 aaPredicted RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 ZNF276Q8N554 614 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 C12orf29Q8N999 325 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 TSTD1Q8NFU3 115 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 EZH1Q92800 747 aaPredicted RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 UBXN6Q9BZV1 441 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 APOBEC3GQ9HC16 384 aaKnown RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 CYLDQ9NQC7 956 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 FAM49BQ9NUQ9 324 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 RAB20Q9NX57 234 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 GMIPQ9P107 970 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 LSM7Q9UK45 103 aaKnown RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 MMP17Q9ULZ9 603 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 SETXQ7Z333 2677 aaKnown RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 KIF26AQ9ULI4 1882 aaPredicted RBP11.04□□□□□ -0.64
GGA1-219ENST00000481613 FREM2Q5SZK8 3169 aa11.04□□□□□ -0.64
GGA1-219ENST00000481613 LOC400499M0QZD8 3231 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 SMG1Q96Q15 3661 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 C4orf47A7E2U8 309 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 DCLK1O15075 740 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 HOXC11O43248 304 aaPredicted RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 BEST1O76090 585 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 KAT7O95251 611 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 ACO1P21399 889 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 PRCPP42785 496 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 PLA2G4AP47712 749 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 DGKEP52429 567 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 YWHAEP62258 255 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 RING1Q06587 406 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 ORC1Q13415 861 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 PNOCQ13519 176 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 ACAP1Q15027 740 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 GAB4Q2WGN9 574 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 USP39Q53GS9 565 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 EOGTQ5NDL2 527 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 TRMT11Q7Z4G4 463 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 SPATA20Q8TB22 786 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 SMARCE1Q969G3 411 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 ELMO3Q96BJ8 720 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 ZFRQ96KR1 1074 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 HHIPQ96QV1 700 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 DUSP16Q9BY84 665 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 CCSER2Q9H7U1 834 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 MMRN2Q9H8L6 949 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 METTL14Q9HCE5 456 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.03□□□□□ -0.64
GGA1-219ENST00000481613 ARHGEF4Q9NR80 690 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 SPHK2Q9NRA0 654 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 HMGXB4Q9UGU5 601 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 DNMT3LQ9UJW3 386 aa11.03□□□□□ -0.64
GGA1-219ENST00000481613 ASCC3Q8N3C0 2202 aaKnown RBP11.03□□□□□ -0.64
GGA1-219ENST00000481613 HHLA1C9JL84 531 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 RALAP11233 206 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 CD58P19256 250 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 MPLP40238 635 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 KIF11P52732 1056 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 BYSLQ13895 437 aaKnown RBP11.02□□□□□ -0.65
GGA1-219ENST00000481613 C2orf27AQ580R0 203 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 TCERG1LQ5VWI1 586 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 CCDC186Q7Z3E2 898 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 RASSF3Q86WH2 238 aa11.02□□□□□ -0.65
GGA1-219ENST00000481613 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms