RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 USP4Q13107 963 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 PASD1Q8IV76 773 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 KIAA2013Q8IYS2 634 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 WDTC1Q8N5D0 677 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 RNF214Q8ND24 703 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 ANKRD20A12PQ8NF67 263 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 CLEC4CQ8WTT0 213 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 SLC35F5Q8WV83 523 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 NXPE3Q969Y0 559 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 SLITRK1Q96PX8 696 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 ULBP1Q9BZM6 244 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 UBXN6Q9BZV1 441 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 TSPY26PQ9H489 355 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 COMMD8Q9NX08 183 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 HESX1Q9UBX0 185 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 KIAA1257Q9ULG3 409 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 SCML2Q9UQR0 700 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 FRYQ5TBA9 3013 aa11.14□□□□□ -0.63
SSBP1-210ENST00000481508 TRAV19A0A0A6YYK7 116 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 KRBA1A5PL33 1030 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 SHISA7A6NL88 538 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 ARNTLO00327 626 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 GFPT2O94808 682 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 TPM2P07951 284 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 TKTL1P51854 596 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 ADIGQ0VDE8 80 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 ZNF77Q15935 545 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 SNX30Q5VWJ9 437 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 CCDC186Q7Z3E2 898 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 NOP9Q86U38 636 aaKnown RBP11.13□□□□□ -0.63
SSBP1-210ENST00000481508 SLC20A1Q8WUM9 679 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 PTCD2Q8WV60 388 aaKnown RBP11.13□□□□□ -0.63
SSBP1-210ENST00000481508 OVCA2Q8WZ82 227 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 DDX1Q92499 740 aaKnown RBP11.13□□□□□ -0.63
SSBP1-210ENST00000481508 ZFRQ96KR1 1074 aaKnown RBP11.13□□□□□ -0.63
SSBP1-210ENST00000481508 FAM81BQ96LP2 452 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
SSBP1-210ENST00000481508 STK33Q9BYT3 514 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 SLC2A4RGQ9NR83 387 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 RYDENQ9NUL5 291 aaKnown RBP11.13□□□□□ -0.63
SSBP1-210ENST00000481508 TDP1Q9NUW8 608 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 SMPD4Q9NXE4 827 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 CA14Q9ULX7 337 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 ASPMQ8IZT6 3477 aa11.13□□□□□ -0.63
SSBP1-210ENST00000481508 AP5Z1O43299 807 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 CKMP06732 381 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 SETSIPP0DME0 302 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 LCP1P13796 627 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 CYP11B1P15538 503 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 PSMC3P17980 439 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 HDCP19113 662 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 GDI1P31150 447 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 AVPR1AP37288 418 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 PBX1P40424 430 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 RPL34P49207 117 aaKnown RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 SLC7A9P82251 487 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 TNK2Q07912 1038 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 FCHO2Q0JRZ9 810 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 ZNF268Q14587 947 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 NR1I3Q14994 352 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 TAF3Q5VWG9 929 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 E4F1Q66K89 784 aaPredicted RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 TRIM68Q6AZZ1 485 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 MFSD6LQ8IWD5 586 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 UBALD2Q8IYN6 164 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 CELF5Q8N6W0 485 aaKnown RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 C1orf131Q8NDD1 294 aaKnown RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 PDZD8Q8NEN9 1154 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 OLIG1Q8TAK6 271 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 BPIFB1Q8TDL5 484 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 SH3RF2Q8TEC5 729 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 KCTD13Q8WZ19 329 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 BAP1Q92560 729 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 PIWIL1Q96J94 861 aaKnown RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 FBXO44Q9H4M3 255 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 NOCTQ9UK39 431 aaKnown RBP11.12□□□□□ -0.63
SSBP1-210ENST00000481508 PCDHGC3Q9UN70 934 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 ARHGAP26Q9UNA1 814 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 CPQQ9Y646 472 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 CACNA1IQ9P0X4 2223 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
SSBP1-210ENST00000481508 OTOL1A6NHN0 477 aaPredicted RBP11.11□□□□□ -0.63
SSBP1-210ENST00000481508 YJEFN3A6XGL0 299 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 SOBPA7XYQ1 873 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 E7ENQ6 273 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 LEFTY2O00292 366 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 DPYSL4O14531 572 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 TLR5O60602 858 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 CAVIN2O95810 425 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 ZBED1O96006 694 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 SERPINC1P01008 464 aa11.11□□□□□ -0.63
SSBP1-210ENST00000481508 MMEP08473 750 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms