RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 EGFP01133 1207 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 RALAP11233 206 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 PON1P27169 355 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 CXCL12P48061 93 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 SATB1Q01826 763 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 CSTF1Q05048 431 aaKnown RBP13.7□□□□□ -0.22
HDAC1-207ENST00000481281 ADIGQ0VDE8 80 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 EXOC3L4Q17RC7 722 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 MIIPQ5JXC2 388 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 C10orf120Q5SQS8 335 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 SMYD5Q6GMV2 418 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 RHBDF2Q6PJF5 856 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 TSSK4Q6SA08 328 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 HTR3DQ70Z44 454 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 TADA2BQ86TJ2 420 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 BBS7Q8IWZ6 715 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 ZBTB44Q8NCP5 570 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 SLC35F5Q8WV83 523 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 NKD2Q969F2 451 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-207ENST00000481281 CDK5RAP1Q96SZ6 601 aaKnown RBP13.7□□□□□ -0.22
HDAC1-207ENST00000481281 FAM126AQ9BYI3 521 aaPredicted RBP13.7□□□□□ -0.22
HDAC1-207ENST00000481281 ULBP1Q9BZM6 244 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 SEMA4AQ9H3S1 761 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 LRRC4Q9HBW1 653 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 SIX2Q9NPC8 291 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 DNMT3LQ9UJW3 386 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 NUDT5Q9UKK9 219 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 PCDHGA2Q9Y5H1 932 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 R4GN57 208 aa13.7□□□□□ -0.22
HDAC1-207ENST00000481281 BECN2A8MW95 431 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 M0QYV0 167 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 GFRA3O60609 400 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 LILRB5O75023 590 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 GABBR2O75899 941 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 ADH1CP00326 375 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 CALCAP01258 141 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 IRF1P10914 325 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 EEF1GP26641 437 aaKnown RBP13.69□□□□□ -0.22
HDAC1-207ENST00000481281 EIF2DP41214 584 aaKnown RBP13.69□□□□□ -0.22
HDAC1-207ENST00000481281 MFAP3P55082 362 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 YWHAGP61981 247 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC1-207ENST00000481281 APBA1Q02410 837 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 PPP2R5DQ14738 602 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 MEA1Q16626 185 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 FBXO43Q4G163 708 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 VWA3BQ502W6 1294 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 PKN3Q6P5Z2 889 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 GJB7Q6PEY0 223 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 ASCL5Q7RTU5 278 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 ENOX1Q8TC92 643 aaKnown RBP13.69□□□□□ -0.22
HDAC1-207ENST00000481281 SHC3Q92529 594 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 SECISBP2LQ93073 1101 aaKnown RBP13.69□□□□□ -0.22
HDAC1-207ENST00000481281 TUBGCP2Q9BSJ2 902 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 NDST4Q9H3R1 872 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 CNGB3Q9NQW8 809 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 SAMSN1Q9NSI8 373 aaKnown RBP13.69□□□□□ -0.22
HDAC1-207ENST00000481281 C2orf42Q9NWW7 574 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 NFE2L3Q9Y4A8 694 aa13.69□□□□□ -0.22
HDAC1-207ENST00000481281 ATG2BQ96BY7 2078 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 CHURC1-FNTBB4DL54 471 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 KCNJ18B7U540 433 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 K7ESF4 209 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 HOXC11O43248 304 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-207ENST00000481281 RNF40O75150 1001 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 STC2O76061 302 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 ADH5P11766 374 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 KRT5P13647 590 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
HDAC1-207ENST00000481281 KCNJ12Q14500 433 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 LY6G5CQ5SRR4 150 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 CDKAL1Q5VV42 579 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 DPY19L2P1Q6NXN4 242 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 PMF1Q6P1K2 205 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 Q6ZNB5 142 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 SIX6OS1Q8N1H7 587 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 NDRG1Q92597 394 aaKnown RBP13.68□□□□□ -0.22
HDAC1-207ENST00000481281 SPHK2Q9NRA0 654 aa13.68□□□□□ -0.22
HDAC1-207ENST00000481281 LSM7Q9UK45 103 aaKnown RBP13.68□□□□□ -0.22
HDAC1-207ENST00000481281 ZFHX2Q9C0A1 2572 aaPredicted RBP13.67□□□□□ -0.22
HDAC1-207ENST00000481281 YJEFN3A6XGL0 299 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 E7ENQ6 273 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 ATG13O75143 517 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 HOXA6P31267 233 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 GPD2P43304 727 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 RPL34P49207 117 aaKnown RBP13.67□□□□□ -0.22
HDAC1-207ENST00000481281 RGS7P49802 495 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 DAOAP59103 153 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 GAD2Q05329 585 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 EFEMP1Q12805 493 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 TCP11X2Q5H9J9 407 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 C12orf40Q86WS4 652 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 MIB1Q86YT6 1006 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 ETFBKMTQ8IXQ9 262 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
HDAC1-207ENST00000481281 HSFY1Q96LI6 401 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms