RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 CCDC26Q8TAB7 109 aa17.89■□□□□ 0.45
HSPG2-209ENST00000480900 KAT5Q92993 513 aa17.89■□□□□ 0.45
HSPG2-209ENST00000480900 INTS2Q9H0H0 1204 aaKnown RBP17.89■□□□□ 0.45
HSPG2-209ENST00000480900 LMBRD1Q9NUN5 540 aa17.89■□□□□ 0.45
HSPG2-209ENST00000480900 C2orf42Q9NWW7 574 aa17.89■□□□□ 0.45
HSPG2-209ENST00000480900 DNMT3LQ9UJW3 386 aa17.89■□□□□ 0.45
HSPG2-209ENST00000480900 SETSIPP0DME0 302 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 IRF1P10914 325 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 ADH5P11766 374 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 EIF2DP41214 584 aaKnown RBP17.88■□□□□ 0.45
HSPG2-209ENST00000480900 TKTL1P51854 596 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 STILQ15468 1287 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 PKN3Q6P5Z2 889 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 LCLAT1Q6UWP7 414 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 HTR3DQ70Z44 454 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 ARHGEF19Q8IW93 802 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 BBS7Q8IWZ6 715 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 EZH1Q92800 747 aaPredicted RBP17.88■□□□□ 0.45
HSPG2-209ENST00000480900 GBP4Q96PP9 640 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 EPC1Q9H2F5 836 aa17.88■□□□□ 0.45
HSPG2-209ENST00000480900 GREM1O60565 184 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 ZBED1O96006 694 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 PLA2G4AP47712 749 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 ZNF132P52740 706 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 DPCR1Q3MIW9 517 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 PKDCCQ504Y2 493 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 LY6G5CQ5SRR4 150 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 PM20D1Q6GTS8 502 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 RRAGAQ7L523 313 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 IRF2BP1Q8IU81 584 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 RBBP8NLQ8NC74 664 aaPredicted RBP17.87■□□□□ 0.45
HSPG2-209ENST00000480900 TFAP2BQ92481 460 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 WBP2Q969T9 261 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 KREMEN1Q96MU8 473 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 LRRC4Q9HBW1 653 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 DACH1Q9UI36 760 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 LSM7Q9UK45 103 aaKnown RBP17.87■□□□□ 0.45
HSPG2-209ENST00000480900 NUDT5Q9UKK9 219 aa17.87■□□□□ 0.45
HSPG2-209ENST00000480900 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.87■□□□□ 0.45
HSPG2-209ENST00000480900 RNF225M0QZC1 329 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-209ENST00000480900 TULP2O00295 520 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 MDM4O15151 490 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 HOXC11O43248 304 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-209ENST00000480900 ERCC5P28715 1186 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-209ENST00000480900 GAD2Q05329 585 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 CNGA2Q16280 664 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 TPD52L1Q16890 204 aaPredicted RBP17.86■□□□□ 0.45
HSPG2-209ENST00000480900 ENOSF1Q7L5Y1 443 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 LONP2Q86WA8 852 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 SCML4Q8N228 414 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 UBA3Q8TBC4 463 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 KCTD13Q8WZ19 329 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 ACDQ96AP0 544 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 FAM81BQ96LP2 452 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 ZSWIM1Q9BR11 485 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 ULBP1Q9BZM6 244 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 THAP9Q9H5L6 903 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 SPHK2Q9NRA0 654 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 CNTN6Q9UQ52 1028 aa17.86■□□□□ 0.45
HSPG2-209ENST00000480900 GTPBP10A4D1E9 387 aaKnown RBP17.85■□□□□ 0.45
HSPG2-209ENST00000480900 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.85■□□□□ 0.45
HSPG2-209ENST00000480900 BRD2P25440 801 aaKnown RBP17.85■□□□□ 0.45
HSPG2-209ENST00000480900 CNR2P34972 360 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 FNTBP49356 437 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 YWHAGP61981 247 aaKnown RBP eCLIP17.85■□□□□ 0.45
HSPG2-209ENST00000480900 DMWDQ09019 674 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 ADIGQ0VDE8 80 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 TRIM65Q6PJ69 517 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 SYT13Q7L8C5 426 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 C12orf40Q86WS4 652 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 CREBRFQ8IUR6 639 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 FAM114A1Q8IWE2 563 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 RPLP0P6Q8NHW5 317 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 RUBCNQ92622 972 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 IPO9Q96P70 1041 aaKnown RBP17.85■□□□□ 0.45
HSPG2-209ENST00000480900 PNKPQ96T60 521 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 CRACR2AQ9BSW2 395 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 SMG5Q9UPR3 1016 aaKnown RBP17.85■□□□□ 0.45
HSPG2-209ENST00000480900 SLC8A2Q9UPR5 921 aa17.85■□□□□ 0.45
HSPG2-209ENST00000480900 CCDC163A0A0D9SF12 145 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 K7EQS6 105 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 M0QYV0 167 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 STC2O76061 302 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 APODP05090 189 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 MTIF2P46199 727 aaKnown RBP17.84■□□□□ 0.45
HSPG2-209ENST00000480900 SLC6A11P48066 632 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 COG7P83436 770 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 CT47A1Q5JQC4 288 aaPredicted RBP17.84■□□□□ 0.45
HSPG2-209ENST00000480900 BTBD8Q5XKL5 378 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 HEATR6Q6AI08 1181 aaKnown RBP17.84■□□□□ 0.45
HSPG2-209ENST00000480900 GBP6Q6ZN66 633 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 Q6ZNB5 142 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 RSRC2Q7L4I2 434 aaKnown RBP17.84■□□□□ 0.45
HSPG2-209ENST00000480900 BHLHA9Q7RTU4 235 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 WDR5BQ86VZ2 330 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 TMEM25Q86YD3 366 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 MIB1Q86YT6 1006 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 ETFBKMTQ8IXQ9 262 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 SIX6OS1Q8N1H7 587 aa17.84■□□□□ 0.45
HSPG2-209ENST00000480900 USP33Q8TEY7 942 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms