RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 LLGL2Q6P1M3 1020 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 TRIML2Q8N7C3 387 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 HIPK4Q8NE63 616 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 TFB1MQ8WVM0 346 aaKnown RBP11.04□□□□□ -0.64
SIK3-210ENST00000480468 USP6NLQ92738 828 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 KCNN1Q92952 543 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 RTKNQ9BST9 563 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 C20orf27Q9GZN8 174 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 ZNF395Q9H8N7 513 aaPredicted RBP11.04□□□□□ -0.64
SIK3-210ENST00000480468 PALMDQ9NP74 551 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 PARVAQ9NVD7 372 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 XPO7Q9UIA9 1087 aaKnown RBP11.04□□□□□ -0.64
SIK3-210ENST00000480468 TEX264Q9Y6I9 313 aa11.04□□□□□ -0.64
SIK3-210ENST00000480468 GAKO14976 1311 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 ARHGEF35A5YM69 484 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 TISP43B9A030 160 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 ZBTB39O15060 712 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 CLASP2O75122 1294 aaKnown RBP11.03□□□□□ -0.64
SIK3-210ENST00000480468 BMP10O95393 424 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 PSMC3P17980 439 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 ELK3P41970 407 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 KCNC4Q03721 635 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 GK3PQ14409 553 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 AOC3Q16853 763 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 DCDC5Q6ZRR9 648 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 HM13Q8TCT9 377 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 TAS1R2Q8TE23 839 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 DCAF4Q8WV16 495 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 DLG3Q92796 817 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 SNX27Q96L92 541 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 SERPINI1Q99574 410 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 AMNQ9BXJ7 453 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
SIK3-210ENST00000480468 VPS28Q9UK41 221 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.03□□□□□ -0.64
SIK3-210ENST00000480468 CCDC195A0A1B0GUA6 201 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 KBTBD13C9JR72 458 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 TRDMT1O14717 391 aaKnown RBP11.03□□□□□ -0.64
SIK3-210ENST00000480468 H6PDO95479 791 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 SERPINB2P05120 415 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 DSG3P32926 999 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 ZNF76P36508 570 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 NOMO3P69849 1222 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 GTF2BQ00403 316 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 SNRNP35Q16560 246 aaKnown RBP11.03□□□□□ -0.64
SIK3-210ENST00000480468 ATP13A4Q4VNC1 1196 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 C6orf52Q5T4I8 152 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 PAOXQ6QHF9 649 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 C15orf52Q6ZUT6 534 aaKnown RBP11.03□□□□□ -0.64
SIK3-210ENST00000480468 USP37Q86T82 979 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 CLEC10AQ8IUN9 316 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 IGDCC3Q8IVU1 814 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 CYP2W1Q8TAV3 490 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 ZNF778Q96MU6 729 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 CYP4F11Q9HBI6 524 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 KLHL11Q9NVR0 708 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 SELENONQ9NZV5 590 aa11.03□□□□□ -0.64
SIK3-210ENST00000480468 TCRBV7S3A2A0A539 114 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 MAFGO15525 162 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 ADAM23O75077 832 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 PRKCHP24723 683 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 CCR3P51677 355 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 CDKL1Q00532 357 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 WDR78Q5VTH9 848 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 NIPAL1Q6NVV3 410 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 DCLRE1AQ6PJP8 1040 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 OLFML1Q6UWY5 402 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 FRMD7Q6ZUT3 714 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 PPP4R1Q8TF05 950 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 CHPT1Q8WUD6 406 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
SIK3-210ENST00000480468 NEURL2Q9BR09 285 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.65
SIK3-210ENST00000480468 APOL6Q9BWW8 343 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 FRMD8Q9BZ67 464 aaPredicted RBP11.02□□□□□ -0.65
SIK3-210ENST00000480468 GCOM2Q9BZD3 368 aaPredicted RBP11.02□□□□□ -0.65
SIK3-210ENST00000480468 DNAJC16Q9Y2G8 782 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 TTLL3Q9Y4R7 772 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 IVNS1ABPQ9Y6Y0 642 aa11.02□□□□□ -0.65
SIK3-210ENST00000480468 MYOCOSA0A1B0GUC4 107 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 PRSS51A0A1B0GVH4 220 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 TMEM191CA6NGB0 347 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 TRIM64CA6NLI5 447 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 H3BNH8 94 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 CYB561D2O14569 222 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 KRT38O76015 456 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 P4HBP07237 508 aaKnown RBP11.01□□□□□ -0.65
SIK3-210ENST00000480468 TMEM191BP0C7N4 346 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 OCM2P0CE71 109 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 OCMP0CE72 109 aaPredicted RBP11.01□□□□□ -0.65
SIK3-210ENST00000480468 COX4I1P13073 169 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 STAT2P52630 851 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 GDF10P55107 478 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 YWHAGP61981 247 aaKnown RBP eCLIP11.01□□□□□ -0.65
SIK3-210ENST00000480468 DPYSQ14117 519 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 PSMD6Q15008 389 aa11.01□□□□□ -0.65
SIK3-210ENST00000480468 CLPPQ16740 277 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms