RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 DNAJB7Q7Z6W7 309 aaPredicted RBP9.56□□□□□ -0.88
VCP-206ENST00000480327 TMEM150AQ86TG1 271 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 SLC47A2Q86VL8 602 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 FAM71AQ8IYT1 594 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 ELMOD1Q8N336 334 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 CELF5Q8N6W0 485 aaKnown RBP9.56□□□□□ -0.88
VCP-206ENST00000480327 RIN3Q8TB24 985 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 PSMG2Q969U7 264 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 SMARCD1Q96GM5 515 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 FUBP3Q96I24 572 aaKnown RBP eCLIP9.56□□□□□ -0.88
VCP-206ENST00000480327 HNRNPABQ99729 332 aaKnown RBP9.56□□□□□ -0.88
VCP-206ENST00000480327 SMOQ99835 787 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 RTKNQ9BST9 563 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 SMG9Q9H0W8 520 aaKnown RBP9.56□□□□□ -0.88
VCP-206ENST00000480327 SEMA4GQ9NTN9 838 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 HESX1Q9UBX0 185 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 GMEB2Q9UKD1 530 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 TSPAN16Q9UKR8 245 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 CNTN6Q9UQ52 1028 aa9.56□□□□□ -0.88
VCP-206ENST00000480327 TNRC6BQ9UPQ9 1833 aaKnown RBP9.56□□□□□ -0.88
VCP-206ENST00000480327 ASPMQ8IZT6 3477 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 AKAP13Q12802 2813 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 OTOL1A6NHN0 477 aaPredicted RBP9.55□□□□□ -0.88
VCP-206ENST00000480327 LRRC53A6NM62 1247 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 M0QYV0 167 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 O00370 1275 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 SLC30A4O14863 429 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 TRIM66O15016 1216 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 SDHBP21912 280 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 GABRR2P28476 465 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 SOX5P35711 763 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 STAT1P42224 750 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 NRLP54845 237 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 JAM2P57087 298 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 CYP4F8P98187 520 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 PTK2Q05397 1052 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 VEPH1Q14D04 833 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 PON2Q15165 354 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 TAF3Q5VWG9 929 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 HEATR6Q6AI08 1181 aaKnown RBP9.55□□□□□ -0.88
VCP-206ENST00000480327 DENND1BQ6P3S1 775 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 SARM1Q6SZW1 724 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 PRR23CQ6ZRP0 262 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 PRR23BQ6ZRT6 265 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 CLEC20AQ6ZU45 233 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 TTC30AQ86WT1 665 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 PASD1Q8IV76 773 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 ZMIZ2Q8NF64 920 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 ZNF606Q8WXB4 792 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 SECISBP2LQ93073 1101 aaKnown RBP9.55□□□□□ -0.88
VCP-206ENST00000480327 C8orf48Q96LL4 319 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 DUSP16Q9BY84 665 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 SLITRK6Q9H5Y7 841 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 DMAP1Q9NPF5 467 aaPredicted RBP9.55□□□□□ -0.88
VCP-206ENST00000480327 RXFP3Q9NSD7 469 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 POLR3BQ9NW08 1133 aaPredicted RBP9.55□□□□□ -0.88
VCP-206ENST00000480327 HSFX1Q9UBD0 423 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 KIAA1257Q9ULG3 409 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 CEP295Q9C0D2 2601 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 MYOFQ9NZM1 2061 aa9.55□□□□□ -0.88
VCP-206ENST00000480327 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 TULP2O00295 520 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 PIK3R2O00459 728 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 MED7O43513 233 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 LRP3O75074 770 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 CYP11B1P15538 503 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 WEE1P30291 646 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 KRT9P35527 623 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 RGS7P49802 495 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 ZNF75DP51815 510 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 KPNA1P52294 538 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 USP46P62068 366 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 PDE4CQ08493 712 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 GOLGA8FQ08AF8 430 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 GOLGA8DPQ0D2H9 430 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 SIM2Q14190 667 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 CNGA2Q16280 664 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 CSRP2Q16527 193 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 PPM1JQ5JR12 505 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 GPR158Q5T848 1215 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 NAIF1Q69YI7 327 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 LCLAT1Q6UWP7 414 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 GPRIN1Q7Z2K8 1008 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 TMC6Q7Z403 805 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 NOP9Q86U38 636 aaKnown RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 ITIH5Q86UX2 942 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 LONP2Q86WA8 852 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 RALGPS2Q86X27 583 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 VSTM4Q8IW00 320 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 ABCA7Q8IZY2 2146 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
VCP-206ENST00000480327 ANKRD52Q8NB46 1076 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 SCAMP5Q8TAC9 235 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 NETO1Q8TDF5 533 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 CSGALNACT1Q8TDX6 532 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 SLC20A1Q8WUM9 679 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 BAP1Q92560 729 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 E2F7Q96AV8 911 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 MSANTD3Q96H12 275 aa9.54□□□□□ -0.88
VCP-206ENST00000480327 SLC46A2Q9BY10 475 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms