RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 FOXN3O00409 490 aaPredicted RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 TNFRSF10BO14763 440 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 TM4SF5O14894 197 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SART1O43290 800 aaKnown RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 RTN3O95197 1032 aaPredicted RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 ZDHHC11BP0C7U3 371 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 FAM200BP0CF97 657 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SDHBP21912 280 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 CTHP32929 405 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SOX9P48436 509 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 PSEN1P49768 467 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 PDE6CP51160 858 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 ZNF75DP51815 510 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SLC8A3P57103 927 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 POLR2FP61218 127 aaKnown RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 BST2Q10589 180 aaKnown RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 ARHGAP29Q52LW3 1261 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SCARA5Q6ZMJ2 495 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 CLEC20AQ6ZU45 233 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 RRAGAQ7L523 313 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 ZDHHC17Q8IUH5 632 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SPATA2LQ8IUW3 424 aaPredicted RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 RNF214Q8ND24 703 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 PDZD8Q8NEN9 1154 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 ZNF397Q8NF99 534 aaPredicted RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 RIN3Q8TB24 985 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SLC35F5Q8WV83 523 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 ZNF606Q8WXB4 792 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 KAT5Q92993 513 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 CYFIP2Q96F07 1278 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 SPAG5Q96R06 1193 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 B3GNT5Q9BYG0 378 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 MIS12Q9H081 205 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 DPEP3Q9H4B8 488 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 RBM12Q9NTZ6 932 aaKnown RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 TMLHEQ9NVH6 421 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 GTSE1Q9NYZ3 720 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 AJAP1Q9UKB5 411 aaPredicted RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 GTF3C4Q9UKN8 822 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 LAMA1P25391 3075 aa9.39□□□□□ -0.91
DDX56-211ENST00000479602 ZNF638Q14966 1978 aaKnown RBP9.39□□□□□ -0.91
DDX56-211ENST00000479602 CCDC163A0A0D9SF12 145 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 HHLA1C9JL84 531 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 PES1O00541 588 aaKnown RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 TRDMT1O14717 391 aaKnown RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 GZMAP12544 262 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CYP11B1P15538 503 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 TCF3P15923 654 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CD58P19256 250 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 DDX6P26196 483 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDX56-211ENST00000479602 GABRR2P28476 465 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 GNA15P30679 374 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 GPD2P43304 727 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 RAP1GAPP47736 663 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 GABRB2P47870 512 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 SNX16P57768 344 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 PLCB2Q00722 1185 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CDR2Q01850 454 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CENPCQ03188 943 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 LMNB2Q03252 620 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 VEPH1Q14D04 833 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 TMEM196Q5HYL7 178 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 MDH1BQ5I0G3 518 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 PM20D1Q6GTS8 502 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 LAIR1Q6GTX8 287 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 KLHDC10Q6PID8 442 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 Q6ZS52 159 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 DENND5BQ6ZUT9 1274 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CCDC186Q7Z3E2 898 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CACNA2D4Q7Z3S7 1137 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 IRF2BP2Q7Z5L9 587 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 TMEM110Q86TL2 294 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 ACOT1Q86TX2 421 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 LONP2Q86WA8 852 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 GPIHBP1Q8IV16 184 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 CMTM8Q8IZV2 173 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 OLIG1Q8TAK6 271 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 SLC2A14Q8TDB8 520 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 BPIFB1Q8TDL5 484 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 IRGQQ8WZA9 623 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 USP13Q92995 863 aaPredicted RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 VCPIP1Q96JH7 1222 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 ZFYVE19Q96K21 471 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 LPIN3Q9BQK8 851 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 ZSWIM1Q9BR11 485 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 RTKNQ9BST9 563 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 TRIM62Q9BVG3 475 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 ATXN3LQ9H3M9 355 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 FBXO44Q9H4M3 255 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 FBRSL1Q9HCM7 1045 aaKnown RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 HPS4Q9NQG7 708 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 ASNSD1Q9NWL6 643 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 HESX1Q9UBX0 185 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 TSPAN16Q9UKR8 245 aa9.38□□□□□ -0.91
DDX56-211ENST00000479602 LUC7L2Q9Y383 392 aaKnown RBP9.38□□□□□ -0.91
DDX56-211ENST00000479602 NUP210Q8TEM1 1887 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms