RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 LMAN2Q12907 356 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 INTS6LQ5JSJ4 861 aaKnown RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 SHC4Q6S5L8 630 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 LPCAT2Q7L5N7 544 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 DPH6Q7L8W6 267 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 C11orf74Q86VG3 221 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 TTC30AQ86WT1 665 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 WDR49Q8IV35 697 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 SCN4BQ8IWT1 228 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 ADGRF2Q8IZF7 708 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 PHTF2Q8N3S3 785 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 DEFB119Q8N690 84 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 C1orf127Q8N9H9 656 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 XXYLT1Q8NBI6 393 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 RDH13Q8NBN7 331 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 TXNDC5Q8NBS9 432 aaKnown RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 KIF18AQ8NI77 898 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 ZNF507Q8TCN5 953 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 LEO1Q8WVC0 666 aaPredicted RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 COL26A1Q96A83 441 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 SPATA32Q96LK8 384 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 MTMR12Q9C0I1 747 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 BLZF1Q9H2G9 400 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 CAPN10Q9HC96 672 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 CD248Q9HCU0 757 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 ABCB6Q9NP58 842 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 INTS13Q9NVM9 706 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 GDAP2Q9NXN4 497 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 MAGEC2Q9UBF1 373 aaPredicted RBP7.07□□□□□ -1.28
VCP-205ENST00000479300 GTF3C4Q9UKN8 822 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 PCDHA7Q9UN72 937 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 ARHGAP26Q9UNA1 814 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 PAXBP1Q9Y5B6 917 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 ACACAQ13085 2346 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 MYOFQ9NZM1 2061 aa7.07□□□□□ -1.28
VCP-205ENST00000479300 ATP8B3O60423 1300 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CEP192Q8TEP8 1941 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 TRAV19A0A0A6YYK7 116 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 LEFTY2O00292 366 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CLIC2O15247 247 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 ATP2C2O75185 946 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 ADCY5O95622 1261 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CFIP05156 583 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 MYL1P05976 194 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 C7P10643 843 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 P4HA1P13674 534 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 PDE6CP51160 858 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 AP3M2P53677 418 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CYP27A1Q02318 531 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 BIRC3Q13489 604 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 SNRNP35Q16560 246 aaKnown RBP7.06□□□□□ -1.28
VCP-205ENST00000479300 TSR1Q2NL82 804 aaKnown RBP7.06□□□□□ -1.28
VCP-205ENST00000479300 CCDC183Q5T5S1 534 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 RESP18Q5W5W9 173 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 LYSMD4Q5XG99 296 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 LMBRD2Q68DH5 695 aaPredicted RBP7.06□□□□□ -1.28
VCP-205ENST00000479300 CNNM4Q6P4Q7 775 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 RHBDF2Q6PJF5 856 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 TRAPPC11Q7Z392 1133 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 FILIP1Q7Z7B0 1213 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 MARCH9Q86YJ5 346 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 MIB1Q86YT6 1006 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CBWD2Q8IUF1 395 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 SLC41A1Q8IVJ1 513 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 ADGRG2Q8IZP9 1017 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 MINDY1Q8N5J2 469 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 PNPLA1Q8N8W4 532 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 RNF214Q8ND24 703 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 HMGB4Q8WW32 186 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 HPS3Q969F9 1004 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CCDC127Q96BQ5 260 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CRELD1Q96HD1 420 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 FUBP3Q96I24 572 aaKnown RBP eCLIP7.06□□□□□ -1.28
VCP-205ENST00000479300 CGRRF1Q99675 332 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 SYT15Q9BQS2 421 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 NUSAP1Q9BXS6 441 aaKnown RBP7.06□□□□□ -1.28
VCP-205ENST00000479300 RNF38Q9H0F5 515 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 SLC32A1Q9H598 525 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 SLC39A2Q9NP94 309 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CD93Q9NPY3 652 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 AGPAT3Q9NRZ7 376 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 TMEM30AQ9NV96 361 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 SERTAD1Q9UHV2 236 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 RCOR1Q9UKL0 485 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 CDH9Q9ULB4 789 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 ZDHHC9Q9Y397 364 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 NME7Q9Y5B8 376 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 PTPRBP23467 1997 aa7.06□□□□□ -1.28
VCP-205ENST00000479300 A0A0A0MRY4 1105 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 GOLGA6L4A6NEF3 574 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 GABRDO14764 452 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 CLGNO14967 610 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 TRIM24O15164 1050 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 CALUO43852 315 aaPredicted RBP7.05□□□□□ -1.28
VCP-205ENST00000479300 SH3BP5O60239 455 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 KAT7O95251 611 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 NFATC1O95644 943 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 OLFM2O95897 454 aa7.05□□□□□ -1.28
VCP-205ENST00000479300 SERPINF2P08697 491 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms