RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 NCAM2O15394 837 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 GABBR2O75899 941 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-217ENST00000479161 PGFP49763 221 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 DAOAP59103 153 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 YWHAGP61981 247 aaKnown RBP eCLIP16.24■□□□□ 0.19
C9orf3-217ENST00000479161 COG7P83436 770 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 NR1H3Q13133 447 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 SYCP1Q15431 976 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 NFKBIBQ15653 356 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 EML3Q32P44 896 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 MAMSTRQ6ZN01 415 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 ADGRG2Q8IZP9 1017 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 PJA1Q8NG27 643 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 EXOC4Q96A65 974 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 CLDN23Q96B33 292 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 IER2Q9BTL4 223 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 HPS4Q9NQG7 708 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 DUS2Q9NX74 493 aaKnown RBP16.24■□□□□ 0.19
C9orf3-217ENST00000479161 SIT1Q9Y3P8 196 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 PIAS3Q9Y6X2 628 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 MUC6Q6W4X9 2439 aa16.24■□□□□ 0.19
C9orf3-217ENST00000479161 NFATC1O95644 943 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 PDGFBP01127 241 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-217ENST00000479161 CYP11B1P15538 503 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 KRT9P35527 623 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 PLA2G5P39877 138 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 USP8P40818 1118 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 RPS9P46781 194 aaKnown RBP16.23■□□□□ 0.19
C9orf3-217ENST00000479161 IFNAR2P48551 515 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 IER5LQ5T953 404 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 TPRG1Q6ZUI0 275 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 SLC47A2Q86VL8 602 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 CPA6Q8N4T0 437 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 NEK11Q8NG66 645 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 NOX5Q96PH1 765 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 EDEM3Q9BZQ6 932 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 NACA2Q9H009 215 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 LTB4R2Q9NPC1 389 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 ZNF510Q9Y2H8 683 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 CEP83Q9Y592 693 aa16.23■□□□□ 0.19
C9orf3-217ENST00000479161 SPECC1L-ADORA2AF8WAN1 911 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 GREM1O60565 184 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 LSM8O95777 96 aaKnown RBP16.22■□□□□ 0.19
C9orf3-217ENST00000479161 GLI1P08151 1106 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 CTHP32929 405 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 SOX5P35711 763 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 KPNA1P52294 538 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-217ENST00000479161 POLR2FP61218 127 aaKnown RBP16.22■□□□□ 0.19
C9orf3-217ENST00000479161 NR1I3Q14994 352 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 BSPRYQ5W0U4 402 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 MSANTD2Q6P1R3 559 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 DENND1BQ6P3S1 775 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 GPIHBP1Q8IV16 184 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 WDTC1Q8N5D0 677 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 FLCNQ8NFG4 579 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 DDX1Q92499 740 aaKnown RBP16.22■□□□□ 0.19
C9orf3-217ENST00000479161 FAM3CQ92520 227 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 ZFYVE19Q96K21 471 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 ECT2Q9H8V3 914 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 ACP6Q9NPH0 428 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 FAM207AQ9NSI2 230 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-217ENST00000479161 TMEM51Q9NW97 253 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 GTSE1Q9NYZ3 720 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 DLGAP2Q9P1A6 1054 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 CFAP97Q9P2B7 532 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 MYOFQ9NZM1 2061 aa16.22■□□□□ 0.19
C9orf3-217ENST00000479161 CACNA1IQ9P0X4 2223 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 YJEFN3A6XGL0 299 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 E7ENQ6 273 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 GOLGA6L19H0YKK7 550 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 TRDMT1O14717 391 aaKnown RBP16.21■□□□□ 0.19
C9orf3-217ENST00000479161 TBX18O95935 607 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 CCDC172P0C7W6 258 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 EIF2DP41214 584 aaKnown RBP16.21■□□□□ 0.19
C9orf3-217ENST00000479161 STAT1P42224 750 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 PDCLQ13371 301 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 FIGNQ5HY92 759 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 C10orf120Q5SQS8 335 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 BTBD8Q5XKL5 378 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 ZDHHC17Q8IUH5 632 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 SYNPOQ8N3V7 929 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 TMEM105Q8N8V8 129 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 EPS8L1Q8TE68 723 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 IQCDQ96DY2 449 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 SPAG5Q96R06 1193 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 IRX2Q9BZI1 471 aaPredicted RBP16.21■□□□□ 0.19
C9orf3-217ENST00000479161 DCLK3Q9C098 648 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 MIS12Q9H081 205 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 IRF2BPLQ9H1B7 796 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 EBF3Q9H4W6 596 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 ASNSD1Q9NWL6 643 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 STRIP2Q9ULQ0 834 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 SH3BP1Q9Y3L3 701 aa16.21■□□□□ 0.19
C9orf3-217ENST00000479161 HBS1LQ9Y450 684 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms