RNA–Protein interactions for RNA: ENST00000478563.1

CDK13-204, Transcript of cyclin dependent kinase 13, humanhuman

TSL 4

Gene CDK13, Length 700 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-204ENST00000478563 TMEM171Q8WVE6 324 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 STAMQ92783 540 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 DVL3Q92997 716 aaPredicted RBP6.95□□□□□ -1.3
CDK13-204ENST00000478563 LRIG1Q96JA1 1093 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 ZBTB45Q96K62 511 aaPredicted RBP6.95□□□□□ -1.3
CDK13-204ENST00000478563 CPPED1Q9BRF8 314 aaPredicted RBP6.95□□□□□ -1.3
CDK13-204ENST00000478563 TTPALQ9BTX7 342 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 TRIM5Q9C035 493 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 VPS51Q9UID3 782 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 USP22Q9UPT9 525 aa6.95□□□□□ -1.3
CDK13-204ENST00000478563 FAM90A20PA6NIJ5 464 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 MATN2O00339 956 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 TSPAN3O60637 253 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 COPB2P35606 906 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 NPTX2P47972 431 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 CCT4P50991 539 aaKnown RBP6.94□□□□□ -1.3
CDK13-204ENST00000478563 PGDP52209 483 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 SF3A3Q12874 501 aaKnown RBP eCLIP6.94□□□□□ -1.31e-6■■□□□ 11.9
CDK13-204ENST00000478563 TMEM108Q6UXF1 575 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 SYNE3Q6ZMZ3 975 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 KRT77Q7Z794 578 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.94□□□□□ -1.3
CDK13-204ENST00000478563 MCRS1Q96EZ8 462 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 WWC2-AS2Q96NR7 200 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 HIST1H2AAQ96QV6 131 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 MECRQ9BV79 373 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 GHITMQ9H3K2 345 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 PRDM13Q9H4Q3 707 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 RMI1Q9H9A7 625 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 NKIRAS2Q9NYR9 191 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 TBC1D29Q9UFV1 150 aa6.94□□□□□ -1.3
CDK13-204ENST00000478563 PMS2P1A4D2B8 440 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 PATE3B3GLJ2 98 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 B4GALT4O60513 344 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 TMEM63AO94886 807 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 CYP21A2P08686 494 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 CSF1P09603 554 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 SPATA31D3P0C874 917 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 MYCLP12524 364 aaPredicted RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 CHMP24386 653 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 PGM1P36871 562 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 STAT1P42224 750 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 TERF1P54274 439 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 ARF3P61204 181 aaPredicted RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 ARF1P84077 181 aaKnown RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 FHL3Q13643 280 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 CSHL1Q14406 222 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 GPR68Q15743 365 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 P3H1Q32P28 736 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 ALDH1L2Q3SY69 923 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 ZNF484Q5JVG2 852 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 SPECC1Q5M775 1068 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 CFAP58Q5T655 872 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 DGAT2L7PQ6IED9 249 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 TMCO3Q6UWJ1 677 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 ARHGEF18Q6ZSZ5 1173 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 SPATA31D4Q6ZUB0 917 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 ARMC8Q8IUR7 673 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 GPR135Q8IZ08 494 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 USP38Q8NB14 1042 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 MBD3L2Q8NHZ7 208 aaPredicted RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 KCNG4Q8TDN1 519 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 ZNF668Q96K58 619 aaPredicted RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 HAUS2Q9NVX0 235 aa6.93□□□□□ -1.3
CDK13-204ENST00000478563 NDRG4Q9ULP0 352 aaKnown RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.93□□□□□ -1.3
CDK13-204ENST00000478563 CCDC195A0A1B0GUA6 201 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 SYNDIG1LA6NDD5 238 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 NPEPPSL1A6NEC2 478 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 ADM5C9JUS6 153 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 AGPSO00116 658 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 PLOD3O60568 738 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 SLPIP03973 132 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 SLC3A2P08195 630 aaKnown RBP6.92□□□□□ -1.3
CDK13-204ENST00000478563 GNAT2P19087 354 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 ZEB1P37275 1124 aaPredicted RBP6.92□□□□□ -1.3
CDK13-204ENST00000478563 MCM2P49736 904 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 R3HDM1Q15032 1099 aaKnown RBP6.92□□□□□ -1.3
CDK13-204ENST00000478563 BAK1Q16611 211 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 MFSD4BQ5TF39 518 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 ARHGAP40Q5TG30 622 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 SLFN13Q68D06 897 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 CLEC9AQ6UXN8 241 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 TRABD2AQ86V40 505 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 POC1BQ8TC44 478 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 ZDHHC12Q96GR4 267 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 DPYSL5Q9BPU6 564 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 NUDT22Q9BRQ3 303 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 PTDSS2Q9BVG9 487 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 CCDC68Q9H2F9 335 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 NOL7Q9UMY1 257 aaKnown RBP6.92□□□□□ -1.3
CDK13-204ENST00000478563 TSC22D4Q9Y3Q8 395 aa6.92□□□□□ -1.3
CDK13-204ENST00000478563 A0A1W2PRQ8 180 aa6.91□□□□□ -1.3
CDK13-204ENST00000478563 B4DLN1 442 aa6.91□□□□□ -1.3
CDK13-204ENST00000478563 GCSHP23434 173 aa6.91□□□□□ -1.3
CDK13-204ENST00000478563 PRKAR1BP31321 381 aa6.91□□□□□ -1.3
CDK13-204ENST00000478563 PSMC2P35998 433 aaKnown RBP6.91□□□□□ -1.3
CDK13-204ENST00000478563 GGT5P36269 586 aa6.91□□□□□ -1.3
CDK13-204ENST00000478563 RAC3P60763 192 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms