RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 NFIL3Q16649 462 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 SV2AQ7L0J3 742 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 ACOT1Q86TX2 421 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 SYT12Q8IV01 421 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 ZNF513Q8N8E2 541 aaPredicted RBP13.73□□□□□ -0.21
ABCF3-212ENST00000478288 SLC2A14Q8TDB8 520 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 PAGE5Q96GU1 130 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 NACA2Q9H009 215 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 BCCIPQ9P287 314 aaKnown RBP eCLIP13.73□□□□□ -0.21
ABCF3-212ENST00000478288 INVSQ9Y283 1065 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 FRMD4BQ9Y2L6 1034 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 PCDHA5Q9Y5H7 936 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 KNL1Q8NG31 2342 aa13.73□□□□□ -0.21
ABCF3-212ENST00000478288 TCRBV21S2A2A0A5A6 115 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 CACNG3O60359 315 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 BEST1O76090 585 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 CLSTN1O94985 981 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 KIF20AO95235 890 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 CCDC130P13994 396 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 DLG4P78352 724 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 KMT5BQ4FZB7 885 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 EMC10Q5UCC4 262 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 LYSMD4Q5XG99 296 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 SLC23A3Q6PIS1 610 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 TMEM25Q86YD3 366 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 HSCBQ8IWL3 235 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 GRAMD1CQ8IYS0 662 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 ZNF276Q8N554 614 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 HMGB4Q8WW32 186 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 PIGKQ92643 395 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 HNRNPABQ99729 332 aaKnown RBP13.72□□□□□ -0.21
ABCF3-212ENST00000478288 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
ABCF3-212ENST00000478288 CYP3A43Q9HB55 503 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 HMGXB4Q9UGU5 601 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 SERTAD1Q9UHV2 236 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 MBD1Q9UIS9 605 aaPredicted RBP13.72□□□□□ -0.21
ABCF3-212ENST00000478288 TRAF3IP3Q9Y228 551 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 PCDH15Q96QU1 1955 aa13.72□□□□□ -0.21
ABCF3-212ENST00000478288 UPK3BL1B0FP48 263 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 UPK3BL2E5RIL1 263 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 MAP3K13O43283 966 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 AP5Z1O43299 807 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 CALUO43852 315 aaPredicted RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 HSP90AA1P07900 732 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 HOXB2P14652 356 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 CMA1P23946 247 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 NTSR1P30989 418 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 ATP5C1P36542 298 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 PTGER3P43115 390 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 PSEN1P49768 467 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 MAP3K7CLP57077 242 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 MCCD1P59942 119 aaPredicted RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 IRX4P78413 519 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 DNM1Q05193 864 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 ZNF252P-AS1Q0IIN9 211 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 ANO4Q32M45 955 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 TRIM61Q5EBN2 209 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 C1orf220Q5T0J3 134 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 C10orf76Q5T2E6 689 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 SH3PXD2AQ5TCZ1 1133 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 FOXD4L5Q5VV16 416 aaPredicted RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 GRAMD4Q6IC98 578 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 SLC36A4Q6YBV0 504 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 CLEC20AQ6ZU45 233 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 INTS8Q75QN2 995 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 RABEPKQ7Z6M1 372 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 TTC30AQ86WT1 665 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 C12orf29Q8N999 325 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 CEP76Q8TAP6 659 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 RLN3Q8WXF3 142 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 FAXDC2Q96IV6 333 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 XPO6Q96QU8 1125 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 GABRG3Q99928 467 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 NUSAP1Q9BXS6 441 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 IMPG2Q9BZV3 1241 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 DNAI2Q9GZS0 605 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 CD248Q9HCU0 757 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 LSM7Q9UK45 103 aaKnown RBP13.71□□□□□ -0.21
ABCF3-212ENST00000478288 PILRBQ9UKJ0 227 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 WASF3Q9UPY6 502 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 HPSEQ9Y251 543 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 ATRXP46100 2492 aa13.71□□□□□ -0.21
ABCF3-212ENST00000478288 LAMA5O15230 3695 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 CABIN1Q9Y6J0 2220 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 CKAP5Q14008 2032 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 FAM237AA0A1B0GTK4 181 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 A0A1W2PQF6 199 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 PATE3B3GLJ2 98 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 HHLA1C9JL84 531 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 ZNF217O75362 1048 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 HLA-DRAP01903 254 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 PROS1P07225 676 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 PIK3CAP42336 1068 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 PGFP49763 221 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 VAMP7P51809 220 aa13.7□□□□□ -0.22
ABCF3-212ENST00000478288 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms