RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 LILRB3O75022 631 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 RFC2P35250 354 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 MAGEA11P43364 429 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 SMTNL2Q2TAL5 461 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 FBXO46Q6PJ61 603 aaPredicted RBP12.67□□□□□ -0.38
PRPF39-203ENST00000477626 ADAT2Q7Z6V5 191 aaKnown RBP12.67□□□□□ -0.38
PRPF39-203ENST00000477626 SCLYQ96I15 445 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 RNF157Q96PX1 679 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 ARGLU1Q9NWB6 273 aaPredicted RBP12.67□□□□□ -0.38
PRPF39-203ENST00000477626 ARHGEF38Q9NXL2 777 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 APOC4-APOC2K7ER74 178 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 APOC2P02655 101 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 GALTP07902 379 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 PDGFRAP16234 1089 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 SLC9A7Q96T83 725 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 DNAI2Q9GZS0 605 aa12.67□□□□□ -0.38
PRPF39-203ENST00000477626 DCLK1O15075 740 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 NUDT17P0C025 328 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 TTMPQ5BVD1 217 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 ANKRD20A8PQ5CZ79 823 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 RNF25Q96BH1 459 aaPredicted RBP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 C8orf48Q96LL4 319 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 PHACTR1Q9C0D0 580 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 RCOR3Q9P2K3 495 aaPredicted RBP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 ZMYND8Q9ULU4 1186 aaPredicted RBP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 ZNF106Q9H2Y7 1883 aaKnown RBP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 GRAP2O75791 330 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 B3GAT3O94766 335 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 FBXO21O94952 628 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 HSD17B3P37058 310 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 MAP3K7CLP57077 242 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 RNASEH2BQ5TBB1 312 aaKnown RBP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 AFMIDQ63HM1 303 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 MAGOHBQ96A72 148 aaKnown RBP12.66□□□□□ -0.38
PRPF39-203ENST00000477626 HOMER3Q9NSC5 361 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 IGLV3-27P01718 113 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 KRT1P04264 644 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 FAM200BP0CF97 657 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 MAGEA3P43357 314 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 CXCR3P49682 368 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 PDK2Q15119 407 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 DCUN1D2Q6PH85 259 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 ATL2Q8NHH9 583 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 TMPRSS4Q9NRS4 437 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 ZNF212Q9UDV6 495 aa12.66□□□□□ -0.38
PRPF39-203ENST00000477626 CAPN2P17655 700 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 PCSK1P29120 753 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 NOS2P35228 1153 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
PRPF39-203ENST00000477626 KRT17Q04695 432 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 TLE2Q04725 743 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 RTP2Q5QGT7 225 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 PRUNE1Q86TP1 453 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 CCDC26Q8TAB7 109 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 IPO4Q8TEX9 1081 aaKnown RBP12.65□□□□□ -0.38
PRPF39-203ENST00000477626 MAIP1Q8WWC4 291 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 FUBP3Q96I24 572 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRPF39-203ENST00000477626 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 HEMGNQ9BXL5 484 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 RNF208Q9H0X6 261 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 ADAM28Q9UKQ2 775 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 NAALADL1Q9UQQ1 740 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 KCNU1A8MYU2 1149 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 E7ESA3 106 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 CHKAP35790 457 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 EFHC1Q5JVL4 640 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 SNX30Q5VWJ9 437 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 OR6B2Q6IFH4 312 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 SLC8B1Q6J4K2 584 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 CNKSR3Q6P9H4 555 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 GLB1LQ6UWU2 654 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 DEFB106AQ8N104 65 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 ZNF276Q8N554 614 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 NAT8LQ8N9F0 302 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 HASPINQ8TF76 798 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 TOP1MTQ969P6 601 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 ZIM3Q96PE6 472 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 PLEKHA4Q9H4M7 779 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 POPDC2Q9HBU9 364 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 SAE1Q9UBE0 346 aaPredicted RBP12.65□□□□□ -0.38
PRPF39-203ENST00000477626 MFHAS1Q9Y4C4 1052 aa12.65□□□□□ -0.38
PRPF39-203ENST00000477626 AIF1P55008 147 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 YWHAZP63104 245 aaKnown RBP12.65□□□□□ -0.39
PRPF39-203ENST00000477626 VARS2Q5ST30 1063 aaKnown RBP12.65□□□□□ -0.39
PRPF39-203ENST00000477626 ERMARDQ5T6L9 678 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 OVOS1Q6IE37 1185 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 MSANTD2Q6P1R3 559 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 SLC39A13Q96H72 371 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 SPATA17Q96L03 361 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 ULBP1Q9BZM6 244 aa12.65□□□□□ -0.39
PRPF39-203ENST00000477626 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.65□□□□□ -0.39
PRPF39-203ENST00000477626 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.39
PRPF39-203ENST00000477626 FAM72CH0Y354 149 aa12.64□□□□□ -0.39
PRPF39-203ENST00000477626 TJP3O95049 919 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms