RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 DHPSP49366 369 aaPredicted RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 KRT85P78386 507 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 SHC2P98077 582 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 NFIL3Q16649 462 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 ST3GAL2Q16842 350 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 ANO4Q32M45 955 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 MAP7D1Q3KQU3 841 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 C10orf76Q5T2E6 689 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 PSAPL1Q6NUJ1 521 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 CLEC20AQ6ZU45 233 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 HTR3DQ70Z44 454 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 INTS8Q75QN2 995 aaKnown RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 LPCAT2Q7L5N7 544 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 TRMT11Q7Z4G4 463 aaKnown RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 ZNF513Q8N8E2 541 aaPredicted RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 HMGB4Q8WW32 186 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 CCDC47Q96A33 483 aaKnown RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 CHAMP1Q96JM3 812 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 SPATA32Q96LK8 384 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 HNRNPABQ99729 332 aaKnown RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 NT5C1AQ9BXI3 368 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 KLF16Q9BXK1 252 aaPredicted RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 IMPG2Q9BZV3 1241 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 CYP3A43Q9HB55 503 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 PNPLA8Q9NP80 782 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12□□□□□ -0.493e-6■■■□□ 18
HDLBP-236ENST00000477477 OSER1Q9NX31 292 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
HDLBP-236ENST00000477477 SCML2Q9UQR0 700 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 PCDHA5Q9Y5H7 936 aa12□□□□□ -0.49
HDLBP-236ENST00000477477 MAP1BP46821 2468 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 FAM237AA0A1B0GTK4 181 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 PATE3B3GLJ2 98 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 NEDD8-MDP1E9PL57 170 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 TRIM24O15164 1050 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 CYP26A1O43174 497 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 CACNG3O60359 315 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 CILPO75339 1184 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 ACO1P21399 889 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 ATP5C1P36542 298 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 GCLMP48507 274 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 NOVA1P51513 510 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 NDUFA8P51970 172 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 ENPEPQ07075 957 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 PPP3CAQ08209 521 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 GOLGA8FQ08AF8 430 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 GOLGA8DPQ0D2H9 430 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 DPYDQ12882 1025 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 BYSLQ13895 437 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 DAB2IPQ5VWQ8 1189 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 GRAMD4Q6IC98 578 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 KLHDC10Q6PID8 442 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 FAM186BQ8IYM0 893 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 FRMD1Q8N878 549 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 TAS1R2Q8TE23 839 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 PIGKQ92643 395 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 JAKMIP2Q96AA8 810 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 NIF3L1Q9GZT8 377 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 NMUR1Q9HB89 426 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 TMEM9BQ9NQ34 198 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 MARK1Q9P0L2 795 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 EVLQ9UI08 416 aaPredicted RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 MBD1Q9UIS9 605 aaPredicted RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 LSM7Q9UK45 103 aaKnown RBP11.99□□□□□ -0.49
HDLBP-236ENST00000477477 HCN2Q9UL51 889 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 STARD13Q9Y3M8 1113 aa11.99□□□□□ -0.49
HDLBP-236ENST00000477477 ABCA7Q8IZY2 2146 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 A0A1W2PQH9 124 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 CDX4O14627 284 aaPredicted RBP11.98□□□□□ -0.49
HDLBP-236ENST00000477477 MAP3K13O43283 966 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 RARGP13631 454 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 KRT13P13646 458 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 HOXB2P14652 356 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 CD58P19256 250 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 RPL13P26373 211 aaKnown RBP11.98□□□□□ -0.49
HDLBP-236ENST00000477477 NTSR1P30989 418 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 PSMC2P35998 433 aaKnown RBP11.98□□□□□ -0.49
HDLBP-236ENST00000477477 PTGER3P43115 390 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 IRX4P78413 519 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 ZCWPW2Q504Y3 356 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 SPDYCQ5MJ68 293 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 ARMCX6Q7L4S7 300 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 MIB1Q86YT6 1006 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 TMEFF1Q8IYR6 380 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 PGBD3Q8N328 593 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
HDLBP-236ENST00000477477 XPO6Q96QU8 1125 aaKnown RBP11.98□□□□□ -0.49
HDLBP-236ENST00000477477 BBS2Q9BXC9 721 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.98□□□□□ -0.497e-14■□□□□ 11.1
HDLBP-236ENST00000477477 MAPK8IP1Q9UQF2 711 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 CEP295Q9C0D2 2601 aa11.98□□□□□ -0.49
HDLBP-236ENST00000477477 USP24Q9UPU5 2620 aa11.97□□□□□ -0.49
HDLBP-236ENST00000477477 A0A1W2PQF6 199 aa11.97□□□□□ -0.49
HDLBP-236ENST00000477477 GIPC1O14908 333 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms