RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 GOLGA8SH3BPF8 625 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 GOLGA8MH3BSY2 632 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 PGM3O95394 542 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 IFNB1P01574 187 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 HNRNPCP07910 306 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 HOXA13P31271 388 aaPredicted RBP15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 ABCD1P33897 745 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 ALDH18A1P54886 795 aaKnown RBP15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 RAB15P59190 212 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 NADK2Q4G0N4 442 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 HSF5Q4G112 596 aaPredicted RBP15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 MSS51Q4VC12 460 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 MDH1BQ5I0G3 518 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 FBXL19Q6PCT2 694 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 ANKRD23Q86SG2 305 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 SLC26A11Q86WA9 606 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 MFSD14AQ96MC6 490 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 RILPQ96NA2 401 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 TMEM121Q9BTD3 319 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 DHX33Q9H6R0 707 aaKnown RBP15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 ELP3Q9H9T3 547 aa15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 PAIP2BQ9ULR5 123 aaKnown RBP15.83■□□□□ 0.12
CLSTN1-205ENST00000477264 PAPPA2Q9BXP8 1791 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 SNRPAP09012 282 aaKnown RBP15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CD97P48960 835 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 ACADVLP49748 655 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 TAP1Q03518 808 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 GRAMD1BQ3KR37 738 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 BBS9Q3SYG4 887 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 RNF111Q6ZNA4 994 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CBWD2Q8IUF1 395 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 WDR75Q8IWA0 830 aaKnown RBP15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 FRMD8Q9BZ67 464 aaPredicted RBP15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 NRDE2Q9H7Z3 1164 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 ITGB1BP2Q9UKP3 347 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 PARP14Q460N5 1801 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CCDC160A6NGH7 325 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 PI4K2BG5E9Z4 385 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CD48P09326 243 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 RAG1P15918 1043 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 PRDX6P30041 224 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 SERPINB6P35237 376 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CDKN2BP42772 138 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 EMP3P54852 163 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 NR1H2P55055 460 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CBX3Q13185 183 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 APOFQ13790 326 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 CHI3L2Q15782 390 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 SH3D19Q5HYK7 790 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 RARS2Q5T160 578 aaKnown RBP15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 ANKRD22Q5VYY1 191 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 PLA2G4FQ68DD2 849 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 ERO1BQ86YB8 467 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 FBXL18Q96ME1 805 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 KCNK16Q96T55 309 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 RIT2Q99578 217 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 ZNF577Q9BSK1 485 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 RAVER2Q9HCJ3 691 aaKnown RBP15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 PCDH18Q9HCL0 1135 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.82■□□□□ 0.124e-6■■■■■ 111.8
CLSTN1-205ENST00000477264 CDH22Q9UJ99 828 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 PSMD13Q9UNM6 376 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 LZTS1Q9Y250 596 aa15.82■□□□□ 0.12
CLSTN1-205ENST00000477264 TMEM221A6NGB7 291 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 VWA5AO00534 786 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 PMLP29590 882 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 CYP24A1Q07973 514 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 NCOA4Q13772 614 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 LRRC36Q1X8D7 754 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 SV2AQ7L0J3 742 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 POLNQ7Z5Q5 900 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 NUDCD3Q8IVD9 361 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 ABRAQ8N0Z2 381 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 FNDC8Q8TC99 324 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 TRPC4APQ8TEL6 797 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 CCDC127Q96BQ5 260 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 DCUN1D1Q96GG9 259 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 DNAJC1Q96KC8 554 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 THAP1Q9NVV9 213 aa15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 XPO7Q9UIA9 1087 aaKnown RBP15.81■□□□□ 0.12
CLSTN1-205ENST00000477264 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 TCRBV9S1A1TA0A576 114 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 GOLGA8IPA6NC78 632 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 GOLGA8JA6NMD2 632 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 C6orf222P0C671 652 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 ALDH1A3P47895 512 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 PHEXP78562 749 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 TMED1Q13445 227 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 CEP55Q53EZ4 464 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 MAP1SQ66K74 1059 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 CATSPERGQ6ZRH7 1159 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 MOB2Q70IA6 237 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 MCF2L2Q86YR7 1114 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 MAP4K3Q8IVH8 894 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 ZNF513Q8N8E2 541 aaPredicted RBP15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 RSAD2Q8WXG1 361 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
CLSTN1-205ENST00000477264 CMTM5Q96DZ9 223 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms