RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 MBD4O95243 580 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 LATS1O95835 1130 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 PARP1P09874 1014 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 U2AF1L5P0DN76 240 aaPredicted RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 FCER1AP12319 257 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 RPL17P18621 184 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 ENPP1P22413 925 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 SMARCA1P28370 1054 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 ARPC4P59998 168 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 U2AF1Q01081 240 aaKnown RBP eCLIP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 PKP1Q13835 747 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 BTG3Q14201 252 aaPredicted RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TCEA2Q15560 299 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TXNRD1Q16881 649 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TMEM119Q4V9L6 283 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 PABPC1LQ4VXU2 614 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 FAAH2Q6GMR7 532 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 NAA16Q6N069 864 aaPredicted RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 CYB5D1Q6P9G0 228 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 PACS1Q6VY07 963 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 DZIP1Q86YF9 867 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 RASAL3Q86YV0 1011 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 ARHGAP18Q8N392 663 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 PPM1KQ8N3J5 372 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TOR1AIP2Q8NFQ8 470 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 KLHDC4Q8TBB5 520 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TBC1D15Q8TC07 691 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 NEK9Q8TD19 979 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TRPC4APQ8TEL6 797 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 MAIP1Q8WWC4 291 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 CASKIN2Q8WXE0 1202 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 NINJ1Q92982 152 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TMEM125Q96AQ2 219 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 RGMAQ96B86 450 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 OPTNQ96CV9 577 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 RAX2Q96IS3 184 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 ZMAT2Q96NC0 199 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 HAPLN3Q96S86 360 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 CARD6Q9BX69 1037 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 VCX3BQ9H321 246 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 TMEM165Q9HC07 324 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 VCX3AQ9NNX9 186 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 DMRT3Q9NQL9 472 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 RBM12Q9NTZ6 932 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 DDX19AQ9NUU7 478 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 INTS13Q9NVM9 706 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 CTNNAL1Q9UBT7 734 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 G3BP2Q9UN86 482 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 C15orf41Q9Y2V0 281 aa4.81□□□□□ -1.64
PIKFYVE-209ENST00000477200 AK9Q5TCS8 1911 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 LAMC1P11047 1609 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 NPHP3Q7Z494 1330 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CDHR2Q9BYE9 1310 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GPR75-ASB3A0A0A6YYF3 556 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GOLGA6L10A0A0M3HER8 536 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 TCRBV7S2A1N4TA0A589 114 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 USP27XA6NNY8 438 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 LRRIQ3A6PVS8 624 aaPredicted RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 TMEM110-MUSTN1A8MSY1 372 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 BECN2A8MW95 431 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GOLGA8KD6RF30 607 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 MYO1FO00160 1098 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 SH3BP5O60239 455 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CHRM2P08172 466 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 RPSAP08865 295 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GSTA2P09210 222 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GHRP10912 638 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CCKBRP32239 447 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 KIF5BP33176 963 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 HSPA4P34932 840 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 GNAQP50148 359 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CCNG1P51959 295 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 RARSP54136 660 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 FOXG1P55316 489 aaPredicted RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 MRPS25P82663 173 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 NSUN2Q08J23 767 aaKnown RBP eCLIP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 XRCC4Q13426 336 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 BYSLQ13895 437 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CASP8Q14790 479 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 SEPT2Q15019 361 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 RCN1Q15293 331 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 E2F5Q15329 346 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 TKFCQ3LXA3 575 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 EMC10Q5UCC4 262 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 ARMC3Q5W041 872 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 THOC7Q6I9Y2 204 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 WDR93Q6P2C0 686 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 ZNF517Q6ZMY9 492 aaPredicted RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 NCCRP1Q6ZVX7 275 aaPredicted RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 MAATS1Q7Z4T9 603 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 TMEM110Q86TL2 294 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CHD1LQ86WJ1 897 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 HOMER1Q86YM7 354 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 CCDC13Q8IYE1 715 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 AHI1Q8N157 1196 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 RASSF8Q8NHQ8 419 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 BCAS4Q8TDM0 211 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 SREK1Q8WXA9 508 aaKnown RBP4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 IRGQQ8WZA9 623 aa4.8□□□□□ -1.64
PIKFYVE-209ENST00000477200 RUBCNQ92622 972 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms