RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 WSCD1Q658N2 575 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 CSGALNACT2Q8N6G5 542 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 TOP6BLQ8N6T0 577 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 OR10T2Q8NGX3 314 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 KIF2CQ99661 725 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 P2RY13Q9BPV8 354 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 FAM213AQ9BRX8 229 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 RBSNQ9H1K0 784 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 OLFML3Q9NRN5 406 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 BLOC1S4Q9NUP1 217 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 DDX43Q9NXZ2 648 aaKnown RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 RBAKQ9NYW8 714 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-214ENST00000477152 AGAP1Q9UPQ3 857 aa7.77□□□□□ -1.17
BRCA1-214ENST00000477152 GREB1Q4ZG55 1949 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SCN1AP35498 2009 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ELOA3CA0A087WX78 387 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 VPS37CA5D8V6 355 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SHISA7A6NL88 538 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ELOA3DA6NLF2 546 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 K7ESF4 209 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SLC9A3R1O14745 358 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 EXTL3O43909 919 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 VNN2O95498 520 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 NFATC1O95644 943 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 CKMP06732 381 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ADRB1P08588 477 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ZNF806P0C7X5 589 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 VSIG8P0DPA2 414 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 IDEP14735 1019 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 EPHA1P21709 976 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 POLR2BP30876 1174 aaKnown RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 STAT6P42226 847 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 DPP6P42658 865 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SOX9P48436 509 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ELOA3BQ3SY89 546 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ZC2HC1CQ53FD0 456 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 TMEM196Q5HYL7 178 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 PPM1JQ5JR12 505 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 STXBP5Q5T5C0 1151 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 LMBRD2Q68DH5 695 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 DYMQ7RTS9 669 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SFR1Q86XK3 245 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 BRSK2Q8IWQ3 736 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ELOA3Q8NG57 546 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 TTC8Q8TAM2 541 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 NOC3LQ8WTT2 800 aaKnown RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 CD101Q93033 1021 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ZFYVE19Q96K21 471 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 FAM83CQ9BQN1 747 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SLC46A2Q9BY10 475 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 VPS45Q9NRW7 570 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 RBM12Q9NTZ6 932 aaKnown RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 DUS2Q9NX74 493 aaKnown RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 GDAP2Q9NXN4 497 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 MAGEC2Q9UBF1 373 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ADAMTS1Q9UHI8 967 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 GPN3Q9UHW5 284 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 SRPRBQ9Y5M8 271 aaKnown RBP7.76□□□□□ -1.17
BRCA1-214ENST00000477152 COL4A3Q01955 1670 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 F5P12259 2224 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 USP34Q70CQ2 3546 aa7.76□□□□□ -1.17
BRCA1-214ENST00000477152 ZNF292O60281 2723 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ZNF233A6NK53 670 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ANKRD63C9JTQ0 380 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PPEF2O14830 753 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SOAT2O75908 522 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ALDH1A2O94788 518 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 NOL4O94818 638 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 EPN2O95208 641 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 APBB3O95704 486 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ITGB3P05106 788 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 FAM163BP0C2L3 166 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ATF6P18850 670 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 MAGEA11P43364 429 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 DMWDQ09019 674 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 BYSLQ13895 437 aaKnown RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 MTF1Q14872 753 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PCSK7Q16549 785 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 CFAP221Q4G0U5 840 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 USP39Q53GS9 565 aaKnown RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SLC39A4Q6P5W5 647 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 VSTM1Q6UX27 236 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 DDX42Q86XP3 938 aaKnown RBP eCLIP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 GPD1LQ8N335 351 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 OSCP1Q8WVF1 389 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 RSPRY1Q96DX4 576 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 MYRFLQ96LU7 910 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PI4K2AQ9BTU6 479 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 DNAI2Q9GZS0 605 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 CUEDC2Q9H467 287 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 ZSCAN16Q9H4T2 348 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 EBF3Q9H4W6 596 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 TRPC7Q9HCX4 862 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PARD6AQ9NPB6 346 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PANK4Q9NVE7 773 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 CDH9Q9ULB4 789 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 PPM1HQ9ULR3 514 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 SNX9Q9Y5X1 595 aa7.75□□□□□ -1.17
BRCA1-214ENST00000477152 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.75□□□□□ -1.17
BRCA1-214ENST00000477152 MYMKA6NI61 221 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms