RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 NUP205Q92621 2012 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 A0A1W2PQH9 124 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 FAM92AA1XBS5 289 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 NEDD8-MDP1E9PL57 170 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 MAP3K13O43283 966 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 CALUO43852 315 aaPredicted RBP12.32□□□□□ -0.44
VARS2-208ENST00000477052 FOXD2O60548 495 aaPredicted RBP12.32□□□□□ -0.44
VARS2-208ENST00000477052 KCNK5O95279 499 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 FAM200BP0CF97 657 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 P4HA1P13674 534 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 ACO1P21399 889 aaKnown RBP12.32□□□□□ -0.44
VARS2-208ENST00000477052 NR2F2P24468 414 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 SYKP43405 635 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 IRX4P78413 519 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 ZNF394Q53GI3 561 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 SNX30Q5VWJ9 437 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 BTBD8Q5XKL5 378 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 EGFLAMQ63HQ2 1017 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 CLEC20AQ6ZU45 233 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 TOGARAM2Q6ZUX3 1019 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 OLIG1Q8TAK6 271 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 WHAMMQ8TF30 809 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
VARS2-208ENST00000477052 KLF16Q9BXK1 252 aaPredicted RBP12.32□□□□□ -0.44
VARS2-208ENST00000477052 SLC6A17Q9H1V8 727 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 TMEM74BQ9NUR3 256 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 PLK2Q9NYY3 685 aa12.32□□□□□ -0.44
VARS2-208ENST00000477052 MYO18AQ92614 2054 aaKnown RBP12.32□□□□□ -0.44
VARS2-208ENST00000477052 KMT2BQ9UMN6 2715 aaPredicted RBP12.31□□□□□ -0.44
VARS2-208ENST00000477052 A0A0A0MRY4 1105 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 HOXC11O43248 304 aaPredicted RBP12.31□□□□□ -0.44
VARS2-208ENST00000477052 EIF2DP41214 584 aaKnown RBP12.31□□□□□ -0.44
VARS2-208ENST00000477052 P2RY2P41231 377 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 TNFRSF4P43489 277 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 DPYDQ12882 1025 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 UAP1L1Q3KQV9 507 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 EOGTQ5NDL2 527 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 SCD5Q86SK9 330 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 UNC93AQ86WB7 457 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 FAM186BQ8IYM0 893 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 ZNF513Q8N8E2 541 aaPredicted RBP12.31□□□□□ -0.44
VARS2-208ENST00000477052 CCDC26Q8TAB7 109 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 SEMA4DQ92854 862 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 BBS2Q9BXC9 721 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 CD93Q9NPY3 652 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 TLR8Q9NR97 1041 aaKnown RBP12.31□□□□□ -0.44
VARS2-208ENST00000477052 DNAJC17Q9NVM6 304 aaKnown RBP12.31□□□□□ -0.44
VARS2-208ENST00000477052 DEC1Q9P2X7 70 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 TRAF3IP3Q9Y228 551 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 RAD54BQ9Y620 910 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 GON4LQ3T8J9 2241 aa12.31□□□□□ -0.44
VARS2-208ENST00000477052 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 WASH3PC4AMC7 463 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 PRRT4C9JH25 899 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 CDX4O14627 284 aaPredicted RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 IKBKBO14920 756 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 KHNYNO15037 678 aaKnown RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 ALDH1A2O94788 518 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 RHOBTB3O94955 611 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 TOP3BO95985 862 aaKnown RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 HMBSP08397 361 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 RARGP13631 454 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 TYRP14679 529 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 GABRG2P18507 467 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 SPINK2P20155 84 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 PMLP29590 882 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 ATP5C1P36542 298 aaKnown RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 MAPK8P45983 427 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 TUBP50607 506 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 KRT85P78386 507 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 ST3GAL2Q16842 350 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 MAP7D1Q3KQU3 841 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 PPP1R26Q5T8A7 1209 aaPredicted RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 GRAMD4Q6IC98 578 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 KIAA1211LQ6NV74 962 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 HTR3DQ70Z44 454 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 TERB1Q8NA31 727 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 DDX1Q92499 740 aaKnown RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 TAF4BQ92750 862 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 OTUB2Q96DC9 234 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 HNRNPABQ99729 332 aaKnown RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 ARID3AQ99856 593 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 NT5C1AQ9BXI3 368 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 FBXO44Q9H4M3 255 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 POLMQ9NP87 494 aaPredicted RBP12.3□□□□□ -0.44
VARS2-208ENST00000477052 COMMD8Q9NX08 183 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 USP25Q9UHP3 1055 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 NAGPAQ9UK23 515 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 ANGPTL2Q9UKU9 493 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 SCML2Q9UQR0 700 aa12.3□□□□□ -0.44
VARS2-208ENST00000477052 A0A1W2PQF6 199 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 CILPO75339 1184 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 KRT13P13646 458 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 HOXB2P14652 356 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 ITPKAP23677 461 aa12.29□□□□□ -0.44
VARS2-208ENST00000477052 INCA1Q0VD86 236 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms