RNA–Protein interactions for RNA: ENST00000476648.5

SNX5-209, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-209ENST00000476648 LIX1LQ8IVB5 337 aa4.41□□□□□ -1.7
SNX5-209ENST00000476648 PNISRQ8TF01 805 aaKnown RBP4.41□□□□□ -1.7
SNX5-209ENST00000476648 EDC3Q96F86 508 aaKnown RBP4.41□□□□□ -1.7
SNX5-209ENST00000476648 C5orf34Q96MH7 638 aa4.41□□□□□ -1.7
SNX5-209ENST00000476648 GEMIN8Q9NWZ8 242 aaKnown RBP4.41□□□□□ -1.7
SNX5-209ENST00000476648 MGAT4CQ9UBM8 478 aa4.41□□□□□ -1.7
SNX5-209ENST00000476648 NKX1-2Q9UD57 310 aaPredicted RBP4.41□□□□□ -1.7
SNX5-209ENST00000476648 BTBD19C9JJ37 291 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 PPP6CO00743 305 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 THAP12O43422 761 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 MBPP02686 304 aaPredicted RBP4.4□□□□□ -1.71
SNX5-209ENST00000476648 PRR35P0CG20 571 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 CERS1P27544 350 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 RBL1P28749 1068 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 ATICP31939 592 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 MTHFSP49914 203 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 COPB1P53618 953 aaKnown RBP4.4□□□□□ -1.71
SNX5-209ENST00000476648 HLTFQ14527 1009 aaKnown RBP eCLIP4.4□□□□□ -1.71
SNX5-209ENST00000476648 DAZAP2Q15038 168 aaPredicted RBP4.4□□□□□ -1.71
SNX5-209ENST00000476648 SUPT20HL1Q3ZLR7 823 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 AWAT1Q58HT5 328 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 CLEC9AQ6UXN8 241 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 YTHDF3Q7Z739 585 aaKnown RBP4.4□□□□□ -1.71
SNX5-209ENST00000476648 GALNT16Q8N428 558 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 MBD3L2Q8NHZ7 208 aaPredicted RBP4.4□□□□□ -1.71
SNX5-209ENST00000476648 SUN3Q8TAQ9 357 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 ADAMTS18Q8TE60 1221 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 SMCR8Q8TEV9 937 aaPredicted RBP4.4□□□□□ -1.71
SNX5-209ENST00000476648 ZNF778Q96MU6 729 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 WDR24Q96S15 920 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 TMEM8AQ9HCN3 771 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 PDGFCQ9NRA1 345 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 SEMA5BQ9P283 1151 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 STEAP1Q9UHE8 339 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 BTBD3Q9Y2F9 522 aa4.4□□□□□ -1.71
SNX5-209ENST00000476648 ANO9A1A5B4 782 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 WDR91A4D1P6 747 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 TMPRSS11DO60235 418 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 CD19P15391 556 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 MST1P26927 711 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 GABRB3P28472 473 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 STT3AP46977 705 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 GPC5P78333 572 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 CFHR3Q02985 330 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 LARS2Q15031 903 aaKnown RBP4.39□□□□□ -1.71
SNX5-209ENST00000476648 ACOX1Q15067 660 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 SEC23BQ15437 767 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 ZNF626Q68DY1 528 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 ABLIM2Q6H8Q1 611 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 SLC18B1Q6NT16 456 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 HIBCHQ6NVY1 386 aaPredicted RBP4.39□□□□□ -1.71
SNX5-209ENST00000476648 CRTC1Q6UUV9 634 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 PNPLA1Q8N8W4 532 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 MAFAQ8NHW3 353 aaPredicted RBP4.39□□□□□ -1.71
SNX5-209ENST00000476648 IGFBPL1Q8WX77 278 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 LRRC46Q96FV0 321 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
SNX5-209ENST00000476648 SLC25A32Q9H2D1 315 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 HEYLQ9NQ87 328 aaPredicted RBP4.39□□□□□ -1.71
SNX5-209ENST00000476648 SNX15Q9NRS6 342 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 TFCP2L1Q9NZI6 479 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 ZNF70Q9UC06 446 aaPredicted RBP4.39□□□□□ -1.71
SNX5-209ENST00000476648 ZNF804BA4D1E1 1349 aa4.39□□□□□ -1.71
SNX5-209ENST00000476648 SMIM35A0A1B0GVV1 85 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 OR2W5A6NFC9 320 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 TP73O15350 636 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 CA12O43570 354 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 NCK2O43639 380 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 PRAMEF2O60811 474 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 KELP23276 732 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 EIF4A1P60842 406 aaKnown RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 DNASE1L3Q13609 305 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 EZH2Q15910 746 aaKnown RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 ST3GAL2Q16842 350 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 AASDHQ4L235 1098 aaPredicted RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 MTX3Q5HYI7 312 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 MEX3CQ5U5Q3 659 aaKnown RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 PAPD7Q5XG87 772 aaKnown RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 RAP1GAP2Q684P5 730 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 ZNF425Q6IV72 752 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 SERPINA13PQ6UXR4 307 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 ZNF813Q6ZN06 617 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 CCDC33Q8N5R6 958 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 C12orf76Q8N812 135 aaPredicted RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.38□□□□□ -1.71
SNX5-209ENST00000476648 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 FYTTD1Q96QD9 318 aaKnown RBP4.38□□□□□ -1.71
SNX5-209ENST00000476648 ARNT2Q9HBZ2 717 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 ZBTB26Q9HCK0 441 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 STARD7Q9NQZ5 370 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 VPS45Q9NRW7 570 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 FZD4Q9ULV1 537 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 WDR17Q8IZU2 1322 aa4.38□□□□□ -1.71
SNX5-209ENST00000476648 CYP2D7A0A087X1C5 515 aa4.37□□□□□ -1.71
SNX5-209ENST00000476648 UBE2Q2LH0YL09 131 aa4.37□□□□□ -1.71
SNX5-209ENST00000476648 FCHO1O14526 889 aa4.37□□□□□ -1.71
SNX5-209ENST00000476648 APOL1O14791 398 aa4.37□□□□□ -1.71
SNX5-209ENST00000476648 DHHO43323 396 aa4.37□□□□□ -1.71
SNX5-209ENST00000476648 SNX2O60749 519 aa4.37□□□□□ -1.71
SNX5-209ENST00000476648 BCAR3O75815 825 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms