RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 PTPRDP23468 1912 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 GREB1Q4ZG55 1949 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.37□□□□□ -0.59
SEC13-214ENST00000476597 PPP1R3GB7ZBB8 358 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 PSMA7O14818 248 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 HOXC11O43248 304 aaPredicted RBP11.37□□□□□ -0.59
SEC13-214ENST00000476597 GADD45BO75293 160 aaPredicted RBP11.37□□□□□ -0.59
SEC13-214ENST00000476597 APODP05090 189 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 CCDC192P0DO97 292 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 IRF1P10914 325 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
SEC13-214ENST00000476597 PPP1R2P41236 205 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 KIR2DL1P43626 348 aaPredicted RBP11.37□□□□□ -0.59
SEC13-214ENST00000476597 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 ATXN1P54253 815 aaKnown RBP11.37□□□□□ -0.59
SEC13-214ENST00000476597 CUL2Q13617 745 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 RAB41Q5JT25 222 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 EMC10Q5UCC4 262 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 BTBD8Q5XKL5 378 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 FOXR2Q6PJQ5 311 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 DGLUCYQ7Z3D6 616 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 KBTBD6Q86V97 674 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 SFTPA1Q8IWL2 248 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 ETFBKMTQ8IXQ9 262 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 PHTF2Q8N3S3 785 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 ANKRD52Q8NB46 1076 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 TSTD1Q8NFU3 115 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 CEP63Q96MT8 703 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 ARHGEF4Q9NR80 690 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 CLIC5Q9NZA1 410 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 DNMT3LQ9UJW3 386 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 NUDT5Q9UKK9 219 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 MMP17Q9ULZ9 603 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
SEC13-214ENST00000476597 PMM2O15305 246 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 TULP3O75386 442 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 RALAP11233 206 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 FMO5P49326 533 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 MORC3Q14149 939 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 CRY1Q16526 586 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 PLK5Q496M5 336 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 HSF5Q4G112 596 aaPredicted RBP11.36□□□□□ -0.59
SEC13-214ENST00000476597 PREPLQ4J6C6 727 aaPredicted RBP11.36□□□□□ -0.59
SEC13-214ENST00000476597 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 TADA2BQ86TJ2 420 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 PIGZQ86VD9 579 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 RASSF3Q86WH2 238 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 TTC30AQ86WT1 665 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 CCDC33Q8N5R6 958 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 UBR7Q8N806 425 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 NAT16Q8N8M0 369 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 IL17RCQ8NAC3 791 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 KCNV2Q8TDN2 545 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 CDK5RAP1Q96SZ6 601 aaKnown RBP11.36□□□□□ -0.59
SEC13-214ENST00000476597 DUSP15Q9H1R2 295 aaPredicted RBP11.36□□□□□ -0.59
SEC13-214ENST00000476597 DEC1Q9P2X7 70 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 NAGPAQ9UK23 515 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 LSM7Q9UK45 103 aaKnown RBP11.36□□□□□ -0.59
SEC13-214ENST00000476597 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
SEC13-214ENST00000476597 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.36□□□□□ -0.59
SEC13-214ENST00000476597 TBC1D3BA6NDS4 549 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 DCLK1O15075 740 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 MDM4O15151 490 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 TRIM24O15164 1050 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 FOXD2O60548 495 aaPredicted RBP11.35□□□□□ -0.59
SEC13-214ENST00000476597 EPN2O95208 641 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 HNRNPLP14866 589 aaKnown RBP eCLIP11.35□□□□□ -0.59
SEC13-214ENST00000476597 TIE1P35590 1138 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 DGKEP52429 567 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 SLC8A3P57103 927 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 YWHAEP62258 255 aaKnown RBP11.35□□□□□ -0.59
SEC13-214ENST00000476597 KDSRQ06136 332 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 GOLGA8FQ08AF8 430 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 GOLGA8DPQ0D2H9 430 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 LRMPQ12912 555 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 ANO4Q32M45 955 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 SGO2Q562F6 1265 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 C10orf120Q5SQS8 335 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 PM20D1Q6GTS8 502 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 TMEM92Q6UXU6 159 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 Q6ZNB5 142 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 PRR23CQ6ZRP0 262 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 ALLCQ8N6M5 410 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 TXNDC5Q8NBS9 432 aaKnown RBP11.35□□□□□ -0.59
SEC13-214ENST00000476597 NELFBQ8WX92 580 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 RTKNQ9BST9 563 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 ARRDC1-AS1Q9H2J1 176 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 MARK1Q9P0L2 795 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 WDR35Q9P2L0 1181 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 CIZ1Q9ULV3 898 aaPredicted RBP11.35□□□□□ -0.59
SEC13-214ENST00000476597 STARD13Q9Y3M8 1113 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 PCDHGA5Q9Y5G8 931 aa11.35□□□□□ -0.59
SEC13-214ENST00000476597 SPTBN2O15020 2390 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 ZNF638Q14966 1978 aaKnown RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 SDK1Q7Z5N4 2213 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 SGK1O00141 431 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 TULP2O00295 520 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 XPO1O14980 1071 aaKnown RBP11.34□□□□□ -0.59
SEC13-214ENST00000476597 P4HA2O15460 535 aa11.34□□□□□ -0.59
SEC13-214ENST00000476597 ADAM23O75077 832 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms