RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 GRAMD1BQ3KR37 738 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 FAM153CQ494X1 144 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 ZNF362Q5T0B9 420 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 ANKRD16Q6P6B7 361 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 WDR53Q7Z5U6 358 aaPredicted RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 SIRT6Q8N6T7 355 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 RP9Q8TA86 221 aaKnown RBP5.8□□□□□ -1.48
PTCD3-211ENST00000476215 OBP2BQ9NPH6 170 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 STEAP1Q9UHE8 339 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 GABRQQ9UN88 632 aa5.8□□□□□ -1.48
PTCD3-211ENST00000476215 ARID4BQ4LE39 1312 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-211ENST00000476215 KAT6AQ92794 2004 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 AQP12BA6NM10 295 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 H0YIZ8 118 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 GCOM1H8Y6P7 765 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-211ENST00000476215 CES2O00748 559 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 NPSP0C0P6 89 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 CREB1P16220 341 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 PDIA3P30101 505 aaKnown RBP5.79□□□□□ -1.48
PTCD3-211ENST00000476215 HTR7P34969 479 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 NHLH1Q02575 133 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 FHL3Q13643 280 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 ATP1A4Q13733 1029 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 CLCA4Q14CN2 919 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 KRT72Q14CN4 511 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 PFKFB4Q16877 469 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 CCDC142Q17RM4 750 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 COLEC12Q5KU26 742 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 L1TD1Q5T7N2 865 aaKnown RBP5.79□□□□□ -1.48
PTCD3-211ENST00000476215 TSTD2Q5T7W7 516 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 SYCE2Q6PIF2 218 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 CCDC174Q6PII3 467 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 GRASPQ7Z6J2 395 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-211ENST00000476215 RASAL3Q86YV0 1011 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 RASGRP3Q8IV61 690 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 ABHD11Q8NFV4 315 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 SUN3Q8TAQ9 357 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 CAGE1Q8TC20 777 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 MORC4Q8TE76 937 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 TRIM36Q9NQ86 728 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 COL15A1P39059 1388 aa5.79□□□□□ -1.48
PTCD3-211ENST00000476215 LGALS16A8MUM7 142 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 NPC1O15118 1278 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 TCEA3O75764 348 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 TMEM225BP0DP42 221 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 CACNA2D1P54289 1103 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 ELLP55199 621 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-211ENST00000476215 EIF4A1P60842 406 aaKnown RBP5.78□□□□□ -1.48
PTCD3-211ENST00000476215 BLMHQ13867 455 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 SPARCL1Q14515 664 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 ST3GAL2Q16842 350 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 TBC1D25Q3MII6 688 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 ZACNQ401N2 412 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 CCDC38Q502W7 563 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 PCID2Q5JVF3 399 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 AKNAD1Q5T1N1 836 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 FBXO42Q6P3S6 717 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 ATG16L2Q8NAA4 619 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 WDYHV1Q96HA8 205 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 PRPF18Q99633 342 aaKnown RBP5.78□□□□□ -1.48
PTCD3-211ENST00000476215 DUSP26Q9BV47 211 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 EPS8L2Q9H6S3 715 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 IL17RBQ9NRM6 502 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 SEMA4GQ9NTN9 838 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 LRFN1Q9P244 771 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 PTGFRNQ9P2B2 879 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 TLK1Q9UKI8 766 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 AMFRQ9UKV5 643 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 CA14Q9ULX7 337 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 ADAMTS5Q9UNA0 930 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 DTNAQ9Y4J8 743 aa5.78□□□□□ -1.48
PTCD3-211ENST00000476215 IFRD1O00458 451 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-211ENST00000476215 SPRY2O43597 315 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 C1QL1O75973 258 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 USP1O94782 785 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 WDR47O94967 919 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 TJP3O95049 919 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 CSTBP04080 98 aaKnown RBP5.77□□□□□ -1.49
PTCD3-211ENST00000476215 DRD4P21917 467 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 GALNT1Q10472 559 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-211ENST00000476215 TUBB8Q3ZCM7 444 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 AARS2Q5JTZ9 985 aaKnown RBP5.77□□□□□ -1.49
PTCD3-211ENST00000476215 ERAP2Q6P179 960 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 PTCHD4Q6ZW05 846 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 RD3Q7Z3Z2 195 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 FAM71BQ8TC56 605 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 STYXQ8WUJ0 223 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 NELL1Q92832 810 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 VPS50Q96JG6 964 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 LENG8Q96PV6 779 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-211ENST00000476215 WDR24Q96S15 920 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 FSD1LQ9BXM9 530 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 CPNE5Q9HCH3 593 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 SLC17A6Q9P2U8 582 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 LPAR3Q9UBY5 353 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 ENTPD2Q9Y5L3 495 aa5.77□□□□□ -1.49
PTCD3-211ENST00000476215 ARHGEF17Q96PE2 2063 aaPredicted RBP5.77□□□□□ -1.49
PTCD3-211ENST00000476215 OR2W5A6NFC9 320 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 A8MVJ9 347 aa5.76□□□□□ -1.49
PTCD3-211ENST00000476215 J3KTA2 159 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms