RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ANP32DO95626 131 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 KRT15P19012 456 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 TFE3P19532 575 aaPredicted RBP16.64■□□□□ 0.25
VARS2-207ENST00000476162 ADORA2BP29275 332 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 ATP5OP48047 213 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PSEN2P49810 448 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 NR1H3Q13133 447 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 ITIH4Q14624 930 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PDK2Q15119 407 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 CCL14Q16627 93 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 CA9Q16790 459 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 ZNF618Q5T7W0 954 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 C3orf62Q6ZUJ4 267 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PLD5Q8N7P1 536 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 FBXO36Q8NEA4 188 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 CLEC4CQ8WTT0 213 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 STK32AQ8WU08 396 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 SNRNP25Q9BV90 132 aaKnown RBP16.64■□□□□ 0.25
VARS2-207ENST00000476162 KDM4CQ9H3R0 1056 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 GOLGA2P5Q9HBQ8 144 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PCDH18Q9HCL0 1135 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 BAIAP2L1Q9UHR4 511 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 RABGEF1Q9UJ41 708 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 ZMYND8Q9ULU4 1186 aaPredicted RBP16.64■□□□□ 0.25
VARS2-207ENST00000476162 CORO1CQ9ULV4 474 aaPredicted RBP16.64■□□□□ 0.25
VARS2-207ENST00000476162 DOCK3Q8IZD9 2030 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 FAM47DPA6NHR8 397 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 CCT8L1PA6NM43 557 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 KPNA7A9QM74 516 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 E7ESA3 106 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 SNX3O60493 162 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PIAS1O75925 651 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 CD4P01730 458 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 AXLP30530 894 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 GNL1P36915 607 aaPredicted RBP16.64■□□□□ 0.25
VARS2-207ENST00000476162 HDAC4P56524 1084 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 BEX3Q00994 111 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 BBS9Q3SYG4 887 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PPP1R21Q6ZMI0 780 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PQLC3Q8N755 202 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 PHACTR1Q9C0D0 580 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 HEY1Q9Y5J3 304 aa16.64■□□□□ 0.25
VARS2-207ENST00000476162 MAP3K6O95382 1288 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 MYL3P08590 195 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 RIPK1Q13546 671 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 THEMIS2Q5TEJ8 643 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 PDIK1LQ8N165 341 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 ANKRD52Q8NB46 1076 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 ATP11CQ8NB49 1132 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 PCDH19Q8TAB3 1148 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 TEKT4Q8WW24 435 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 TGS1Q96RS0 853 aaKnown RBP16.63■□□□□ 0.25
VARS2-207ENST00000476162 TRABDQ9H4I3 376 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 USP29Q9HBJ7 922 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 SLC24A2Q9UI40 661 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 RALGAPA2Q2PPJ7 1873 aa16.63■□□□□ 0.25
VARS2-207ENST00000476162 HAS3O00219 553 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 APOL1O14791 398 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 PHBP35232 272 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 WDR4P57081 412 aaKnown RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 GEMIN4P57678 1058 aaKnown RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 SNX16P57768 344 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 SOX4Q06945 474 aaPredicted RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 EFTUD2Q15029 972 aaKnown RBP eCLIP16.62■□□□□ 0.254e-9■■■■■ 39.6
VARS2-207ENST00000476162 PDCD2Q16342 344 aaPredicted RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 PPP6R3Q5H9R7 873 aaPredicted RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 EFHC2Q5JST6 749 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 ZDHHC17Q8IUH5 632 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 CRYBG2Q8N1P7 616 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 TBCBQ99426 244 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 SMAPO00193 183 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 FESP07332 822 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 LCP1P13796 627 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 ATXN1P54253 815 aaKnown RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 BCAR1P56945 870 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 RNASELQ05823 741 aaKnown RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 BST2Q10589 180 aaKnown RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 PALM2Q8IXS6 379 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 C4orf33Q8N1A6 199 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 FBF1Q8TES7 1133 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 MAGEB18Q96M61 343 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 PAIP2Q9BPZ3 127 aaKnown RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 SNX25Q9H3E2 840 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 PPCSQ9HAB8 311 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 GDAP2Q9NXN4 497 aa16.62■□□□□ 0.25
VARS2-207ENST00000476162 PSMC3IPQ9P2W1 217 aaPredicted RBP16.62■□□□□ 0.25
VARS2-207ENST00000476162 A0A1W2PPM1 405 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 TTC36A6NLP5 189 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 LIN7AO14910 233 aaPredicted RBP16.61■□□□□ 0.25
VARS2-207ENST00000476162 MDM4O15151 490 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 KCNN4O15554 427 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 OAS1P00973 400 aaKnown RBP16.61■□□□□ 0.25
VARS2-207ENST00000476162 KCNE1P15382 129 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 DESP17661 470 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 CPT1AP50416 773 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 BCAT1P54687 386 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 RASA2Q15283 850 aa16.61■□□□□ 0.25
VARS2-207ENST00000476162 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms