RNA–Protein interactions for RNA: ENST00000475927.5

SERF2-215, Transcript of small EDRK-rich factor 2, human

TSL 2

Gene SERF2, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF2-215	ENST00000475927	BRD2	P25440	801 aa	Known RBP	13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	RPS9	P46781	194 aa	Known RBP	13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	POLR2F	P61218	127 aa	Known RBP	13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	LRRC32	Q14392	662 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	GRM2	Q14416	872 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	PPP2R5D	Q14738	602 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	NFKBIB	Q15653	356 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	ZNF77	Q15935	545 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	BSPRY	Q5W0U4	402 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	PMF1	Q6P1K2	205 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	HFE2	Q6ZVN8	426 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	UNC45B	Q8IWX7	931 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	C1orf131	Q8NDD1	294 aa	Known RBP	13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	FLCN	Q8NFG4	579 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	FAM3C	Q92520	227 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	SECISBP2L	Q93073	1101 aa	Known RBP	13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	WDR35	Q9P2L0	1181 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	CPQ	Q9Y646	472 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	PIAS3	Q9Y6X2	628 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	MYH10	P35580	1976 aa		13.7	□□□□□ -0.22
SERF2-215	ENST00000475927	PTPRD	P23468	1912 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927		A0A1W2PQH9	124 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	FAM170B	A6NMN3	283 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ARNTL	O00327	626 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CBFA2T2	O43439	604 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ATG13	O75143	517 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	PRAMEF12	O95522	483 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CYP11B1	P15538	503 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CLCN1	P35523	988 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	SOX5	P35711	763 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	EIF2D	P41214	584 aa	Known RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	HARS2	P49590	506 aa	Known RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	YWHAZ	P63104	245 aa	Known RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	GRSF1	Q12849	480 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	NR1I3	Q14994	352 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	FBXO43	Q4G163	708 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	FIGN	Q5HY92	759 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ACBD5	Q5T8D3	534 aa	Predicted RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	DPY19L2P1	Q6NXN4	242 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	SCD5	Q86SK9	330 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	SCUBE3	Q8IX30	993 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	IPO4	Q8TEX9	1081 aa	Known RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	AZIN2	Q96A70	460 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CLDN23	Q96B33	292 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	PPP1R13B	Q96KQ4	1090 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	DDX50	Q9BQ39	737 aa	Known RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	KLF16	Q9BXK1	252 aa	Predicted RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ULBP1	Q9BZM6	244 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	HSD3B7	Q9H2F3	369 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	SYNC	Q9H7C4	482 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ECT2	Q9H8V3	914 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	TBC1D17	Q9HA65	648 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CBX8	Q9HC52	389 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ST7	Q9NRC1	585 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	ASNSD1	Q9NWL6	643 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	RRN3	Q9NYV6	651 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	MARCH2	Q9P0N8	246 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CFAP97	Q9P2B7	532 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	CA14	Q9ULX7	337 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	SIK3	Q9Y2K2	1263 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	BZW2	Q9Y6E2	419 aa	Known RBP	13.69	□□□□□ -0.22
SERF2-215	ENST00000475927	TRIO	O75962	3097 aa		13.69	□□□□□ -0.22
SERF2-215	ENST00000475927		A0A1B0GTH6	734 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	KRBA1	A5PL33	1030 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927		F8VZ95	297 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	TRDMT1	O14717	391 aa	Known RBP	13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	CAPN9	O14815	690 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	LATS1	O95835	1130 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	SLC2A3	P11169	496 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	FER	P16591	822 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	DRD1	P21728	446 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	GBP1	P32455	592 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	CDH5	P33151	784 aa	Predicted RBP	13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	SCNN1A	P37088	669 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	UBASH3A	P57075	661 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	DAOA	P59103	153 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	ADIG	Q0VDE8	80 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	USP4	Q13107	963 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	NNT	Q13423	1086 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	GJB7	Q6PEY0	223 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	LRSAM1	Q6UWE0	723 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	TPRG1	Q6ZUI0	275 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	TOGARAM2	Q6ZUX3	1019 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	ZNF557	Q8N988	423 aa	Predicted RBP	13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	KCNV2	Q8TDN2	545 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	PLD4	Q96BZ4	506 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	LRRC3B	Q96PB8	259 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	SLC22A12	Q96S37	553 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	TSPY26P	Q9H489	355 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	CCSER2	Q9H7U1	834 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	HEBP1	Q9NRV9	189 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	SLC12A6	Q9UHW9	1150 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	CCL26	Q9Y258	94 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	PAXBP1	Q9Y5B6	917 aa		13.68	□□□□□ -0.22
SERF2-215	ENST00000475927	GREB1	Q4ZG55	1949 aa		13.67	□□□□□ -0.22
SERF2-215	ENST00000475927	SPECC1L-ADORA2A	F8WAN1	911 aa		13.67	□□□□□ -0.22
SERF2-215	ENST00000475927	LTF	P02788	710 aa		13.67	□□□□□ -0.22
SERF2-215	ENST00000475927	ATP1A3	P13637	1013 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms