RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 CHORDC1Q9UHD1 332 aaPredicted RBP21.51■■□□□ 1.03
HDAC11-217ENST00000475818 A0A1B0GVT2 93 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 PLK4O00444 970 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 HECTD3Q5T447 861 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 LARP1BQ659C4 914 aaKnown RBP21.5■■□□□ 1.03
HDAC11-217ENST00000475818 DHRS13Q6UX07 377 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 DBX2Q6ZNG2 339 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 MRPL45Q9BRJ2 306 aaKnown RBP21.5■■□□□ 1.03
HDAC11-217ENST00000475818 BBS2Q9BXC9 721 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 PRORYQ9H606 182 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 EIF2B4Q9UI10 523 aaKnown RBP21.5■■□□□ 1.03
HDAC11-217ENST00000475818 NME7Q9Y5B8 376 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 PCDHGB2Q9Y5G2 931 aa21.5■■□□□ 1.03
HDAC11-217ENST00000475818 KCNJ18B7U540 433 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 CLDN5O00501 218 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 HLA-EP13747 358 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 SMAD1Q15797 465 aaKnown RBP21.49■■□□□ 1.03
HDAC11-217ENST00000475818 FUT11Q495W5 492 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 RILPL1Q5EBL4 403 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 TPGS1Q6ZTW0 290 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 OR5B17Q8NGF7 314 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 HVCN1Q96D96 273 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 ANKRD36BP1Q96IX9 119 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 XPO6Q96QU8 1125 aaKnown RBP21.49■■□□□ 1.03
HDAC11-217ENST00000475818 SNX25Q9H3E2 840 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 PCIF1Q9H4Z3 704 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 TBC1D7Q9P0N9 293 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 NFE2L3Q9Y4A8 694 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 PTPRJQ12913 1337 aa21.49■■□□□ 1.03
HDAC11-217ENST00000475818 SHROOM3Q8TF72 1996 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 CACNG3O60359 315 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 PPP1R37O75864 691 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 TYRP14679 529 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 SUZ12Q15022 739 aaKnown RBP21.48■■□□□ 1.03
HDAC11-217ENST00000475818 DYMQ7RTS9 669 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 NUP93Q8N1F7 819 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 KRI1Q8N9T8 703 aaKnown RBP21.48■■□□□ 1.03
HDAC11-217ENST00000475818 PDZD8Q8NEN9 1154 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 CADM4Q8NFZ8 388 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 AK8Q96MA6 479 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 FCRL3Q96P31 734 aaPredicted RBP21.48■■□□□ 1.03
HDAC11-217ENST00000475818 ACCSQ96QU6 501 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 CBWD1Q9BRT8 395 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 NACA2Q9H009 215 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 DPEP3Q9H4B8 488 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 USP36Q9P275 1121 aaKnown RBP21.48■■□□□ 1.03
HDAC11-217ENST00000475818 EXOC7Q9UPT5 735 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 STON1Q9Y6Q2 735 aa21.48■■□□□ 1.03
HDAC11-217ENST00000475818 METTL12A8MUP2 240 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 SLC26A4O43511 780 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 TNFSF14O43557 240 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 LDHAP00338 332 aaKnown RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 GNL1P36915 607 aaPredicted RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 CSNK1EP49674 416 aaKnown RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 STARD3Q14849 445 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 ARL6IP4Q66PJ3 421 aaKnown RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 LRRC69Q6ZNQ3 347 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 CACUL1Q86Y37 369 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 OR6B3Q8NGW1 331 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 SCAMP5Q8TAC9 235 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 SNX19Q92543 992 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 LARP4BQ92615 738 aaKnown RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 BHMTQ93088 406 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 ELOVL4Q9GZR5 314 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 MKRN2Q9H000 416 aaKnown RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 MRPL44Q9H9J2 332 aaKnown RBP21.47■■□□□ 1.03
HDAC11-217ENST00000475818 ITM2CQ9NQX7 267 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 INTS13Q9NVM9 706 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 GMIPQ9P107 970 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 SLCO1B1Q9Y6L6 691 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 KALRNO60229 2985 aa21.47■■□□□ 1.03
HDAC11-217ENST00000475818 GFRA2O00451 464 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 KCNK3O14649 394 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 TLX3O43711 291 aaPredicted RBP21.46■■□□□ 1.03
HDAC11-217ENST00000475818 RTN3O95197 1032 aaPredicted RBP21.46■■□□□ 1.03
HDAC11-217ENST00000475818 TNNC2P02585 160 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 PTPN1P18031 435 aaKnown RBP21.46■■□□□ 1.03
HDAC11-217ENST00000475818 DGKGP49619 791 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 TPMTP51580 245 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 CLDN6P56747 220 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 SEMG2Q02383 582 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 KIF19Q2TAC6 998 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 L1TD1Q5T7N2 865 aaKnown RBP21.46■■□□□ 1.03
HDAC11-217ENST00000475818 METTL3Q86U44 580 aaKnown RBP21.46■■□□□ 1.03
HDAC11-217ENST00000475818 OVCA2Q8WZ82 227 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 STRA6Q9BX79 667 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 B3GNT5Q9BYG0 378 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 SNX11Q9Y5W9 270 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 NAV2Q8IVL1 2488 aa21.46■■□□□ 1.03
HDAC11-217ENST00000475818 GARTP22102 1010 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 EIF2S3P41091 472 aaKnown RBP21.45■■□□□ 1.02
HDAC11-217ENST00000475818 PTPRNQ16849 979 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 SYCP3Q8IZU3 236 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 NXPE2Q96DL1 559 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 KCNK16Q96T55 309 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 WDR35Q9P2L0 1181 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 TENM4Q6N022 2769 aa21.45■■□□□ 1.02
HDAC11-217ENST00000475818 J3QKU1 62 aa21.44■■□□□ 1.02
HDAC11-217ENST00000475818 GCNT3O95395 438 aa21.44■■□□□ 1.02
HDAC11-217ENST00000475818 CISD3P0C7P0 127 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms