RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 ACOT1Q86TX2 421 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 MIB1Q86YT6 1006 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 ZMIZ2Q8NF64 920 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 PARD3BQ8TEW8 1205 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 DUSP9Q99956 384 aaKnown RBP13.14□□□□□ -0.31
CCDC57-208ENST00000475635 SCNM1Q9BWG6 230 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 TMEM121BQ9BXQ6 578 aaPredicted RBP13.14□□□□□ -0.31
CCDC57-208ENST00000475635 CALCOCO1Q9P1Z2 691 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 HCN2Q9UL51 889 aa13.14□□□□□ -0.31
CCDC57-208ENST00000475635 NUMA1Q14980 2115 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 PTPRBP23467 1997 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 K7ELQ4 463 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 VNN1O95497 513 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 C4BPAP04003 597 aaKnown RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 CFIP05156 583 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 HOXD12P35452 270 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 WASP42768 502 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 AFMP43652 599 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 RPL6Q02878 288 aaKnown RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 PEAR1Q5VY43 1037 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 KIAA1211LQ6NV74 962 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 SLC36A4Q6YBV0 504 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 KDF1Q8NAX2 398 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 GOLGA5Q8TBA6 731 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 FOXD4L4Q8WXT5 416 aaPredicted RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 SMOQ99835 787 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 FBXO44Q9H4M3 255 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 SLC32A1Q9H598 525 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 FSCN3Q9NQT6 498 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 TLR8Q9NR97 1041 aaKnown RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 DNAJC17Q9NVM6 304 aaKnown RBP13.13□□□□□ -0.31
CCDC57-208ENST00000475635 HMGXB4Q9UGU5 601 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 STARD13Q9Y3M8 1113 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 ATRXP46100 2492 aa13.13□□□□□ -0.31
CCDC57-208ENST00000475635 TP53BP1Q12888 1972 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 GOLGA4Q13439 2230 aaKnown RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 ANKRD11Q6UB99 2663 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 PLXNB3Q9ULL4 1909 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 A0A1W2PQF6 199 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 NEDD8-MDP1E9PL57 170 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 TBX18O95935 607 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 P4HA1P13674 534 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 NTSR1P30989 418 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 NDST1P52848 882 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 DLG4P78352 724 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 ZNF33AQ06730 810 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 DUOXA1Q1HG43 343 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 FOXD4L6Q3SYB3 417 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 EGFLAMQ63HQ2 1017 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 GRAMD4Q6IC98 578 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 FOXD4L3Q6VB84 417 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 GRAMD1CQ8IYS0 662 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 CHPFQ8IZ52 775 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 CEP76Q8TAP6 659 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 GATA6Q92908 595 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 ERLEC1Q96DZ1 483 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 XPO6Q96QU8 1125 aaKnown RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 ACOX2Q99424 681 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 GTPBP2Q9BX10 602 aaKnown RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 BBS2Q9BXC9 721 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
CCDC57-208ENST00000475635 FAM49BQ9NUQ9 324 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 SLC6A14Q9UN76 642 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 TMEM131Q92545 1883 aa13.12□□□□□ -0.31
CCDC57-208ENST00000475635 BAHCC1Q9P281 2608 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 ACACAQ13085 2346 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 IGHV1OR15-9A0A0B4J2B8 117 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 SPAARA0A1B0GVQ0 90 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 TMEM8BA6NDV4 472 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 ZBTB24O43167 697 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-208ENST00000475635 CACNG3O60359 315 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 GREM1O60565 184 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 SERPINF2P08697 491 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 TYRP14679 529 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 NDUFV2P19404 249 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 ME1P48163 572 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 ATXN3P54252 364 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-208ENST00000475635 GFPT1Q06210 699 aaPredicted RBP13.11□□□□□ -0.31
CCDC57-208ENST00000475635 GOLGA8FQ08AF8 430 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 GOLGA8DPQ0D2H9 430 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 SEMA3BQ13214 749 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 SGSM1Q2NKQ1 1148 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 ZACNQ401N2 412 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 SDE2Q6IQ49 451 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 TPGS1Q6ZTW0 290 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 CRYBG2Q8N1P7 616 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 HDDC3Q8N4P3 179 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 KIAA0895Q8NCT3 520 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 IPO4Q8TEX9 1081 aaKnown RBP13.11□□□□□ -0.31
CCDC57-208ENST00000475635 JAKMIP2Q96AA8 810 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 CAPN10Q9HC96 672 aa13.11□□□□□ -0.31
CCDC57-208ENST00000475635 DMAC2Q9NW81 257 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms