RNA–Protein interactions for RNA: ENST00000475195.5

ATG4B-216, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-216ENST00000475195 MED7O43513 233 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 RALAP11233 206 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 KRT5P13647 590 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 GJA4P35212 333 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 CLCN1P35523 988 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 IFNAR2P48551 515 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 PTPN5P54829 565 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 ANO6Q4KMQ2 910 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 TADA2BQ86TJ2 420 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 CPA6Q8N4T0 437 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 IRGQQ8WZA9 623 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 LMAN1LQ9HAT1 526 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 ACP6Q9NPH0 428 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 DNMT3LQ9UJW3 386 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 NAGPAQ9UK23 515 aa17.3■□□□□ 0.36
ATG4B-216ENST00000475195 M0QYV0 167 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 NFATC1O95644 943 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 UCHL3P15374 230 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 GNA15P30679 374 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 COPB1P53618 953 aaKnown RBP17.29■□□□□ 0.36
ATG4B-216ENST00000475195 DAOAP59103 153 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 YWHAGP61981 247 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATG4B-216ENST00000475195 NR1H3Q13133 447 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 CCINQ13939 588 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 TMEM196Q5HYL7 178 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 RHBDF2Q6PJF5 856 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 C1orf210Q8IVY1 113 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 DHX40Q8IX18 779 aaKnown RBP17.29■□□□□ 0.36
ATG4B-216ENST00000475195 SYNPOQ8N3V7 929 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 WBP2Q969T9 261 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 IER2Q9BTL4 223 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 SLC4A5Q9BY07 1137 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 STK33Q9BYT3 514 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 NDRG2Q9UN36 371 aaKnown RBP17.29■□□□□ 0.36
ATG4B-216ENST00000475195 PCDHGC3Q9UN70 934 aa17.29■□□□□ 0.36
ATG4B-216ENST00000475195 CACNA1IQ9P0X4 2223 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 SMTNL1A8MU46 457 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 E7ENQ6 273 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 TPM2P07951 284 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 GALK1P51570 392 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 PTK2Q05397 1052 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 ADIGQ0VDE8 80 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 DRAP1Q14919 205 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-216ENST00000475195 GAB4Q2WGN9 574 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 DGKKQ5KSL6 1271 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 BSPRYQ5W0U4 402 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 TMEM110Q86TL2 294 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 MAML2Q8IZL2 1156 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-216ENST00000475195 WDTC1Q8N5D0 677 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 NDRG1Q92597 394 aaKnown RBP17.28■□□□□ 0.36
ATG4B-216ENST00000475195 NACA2Q9H009 215 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 LHX5Q9H2C1 402 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 CHRDQ9H2X0 955 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 ABCC13Q9NSE7 274 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 NUDT5Q9UKK9 219 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 SIK3Q9Y2K2 1263 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 DAAM1Q9Y4D1 1078 aa17.28■□□□□ 0.36
ATG4B-216ENST00000475195 PES1O00541 588 aaKnown RBP17.27■□□□□ 0.36
ATG4B-216ENST00000475195 THAP12O43422 761 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 FBXO21O94952 628 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 LCP1P13796 627 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 CDK11BP21127 795 aaKnown RBP17.27■□□□□ 0.36
ATG4B-216ENST00000475195 USP8P40818 1118 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 ACADSBP45954 432 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 RGS7P49802 495 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 BPIFB4P59827 614 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 COG7P83436 770 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 NHLH1Q02575 133 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 IQCB1Q15051 598 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 PON2Q15165 354 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 ANGPT1Q15389 498 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 DHCR24Q15392 516 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 SKOR2Q2VWA4 1001 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-216ENST00000475195 C10orf120Q5SQS8 335 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 DENND1BQ6P3S1 775 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 Q6ZNB5 142 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 SIX6OS1Q8N1H7 587 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 AOPEPQ8N6M6 819 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 ANKRD20A12PQ8NF67 263 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 ERGIC2Q96RQ1 377 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 GANQ9H2C0 597 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 FBRSL1Q9HCM7 1045 aaKnown RBP17.27■□□□□ 0.36
ATG4B-216ENST00000475195 CYTH4Q9UIA0 394 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 SH3BP1Q9Y3L3 701 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 FHOD1Q9Y613 1164 aa17.27■□□□□ 0.36
ATG4B-216ENST00000475195 A0A0A0MRY4 1105 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 LGALS16A8MUM7 142 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 H0Y858 1186 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 MDM4O15151 490 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 CYP17A1P05093 508 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 ZNF165P49910 485 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 GOLGA8FQ08AF8 430 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 GOLGA8DPQ0D2H9 430 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 LRRC32Q14392 662 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 GAS6Q14393 721 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 FKBP15Q5T1M5 1219 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 BTBD8Q5XKL5 378 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 BEND5Q7L4P6 421 aa17.26■□□□□ 0.35
ATG4B-216ENST00000475195 SLC47A2Q86VL8 602 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms