RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 CFAP97Q9P2B7 532 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 PCDHGC3Q9UN70 934 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 DAAM1Q9Y4D1 1078 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 WNT6Q9Y6F9 365 aa17.04■□□□□ 0.32
SRM-204ENST00000475189 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
SRM-204ENST00000475189 YJEFN3A6XGL0 299 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 E7ENQ6 273 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 MDM4O15151 490 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 RALAP11233 206 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 SOX9P48436 509 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 IFNAR2P48551 515 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
SRM-204ENST00000475189 JAM2P57087 298 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 DAOAP59103 153 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 RUNX3Q13761 415 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 EML3Q32P44 896 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 ITPRIPL2Q3MIP1 535 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 C10orf120Q5SQS8 335 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 WDTC1Q8N5D0 677 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 KIAA1958Q8N8K9 716 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 TMEM105Q8N8V8 129 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 NEK11Q8NG66 645 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 STK32AQ8WU08 396 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 WBP2Q969T9 261 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 SLC4A5Q9BY07 1137 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 C8orf33Q9H7E9 229 aaPredicted RBP17.03■□□□□ 0.32
SRM-204ENST00000475189 NLRC4Q9NPP4 1024 aa17.03■□□□□ 0.32
SRM-204ENST00000475189 MTF2Q9Y483 593 aaPredicted RBP17.03■□□□□ 0.32
SRM-204ENST00000475189 E2F8A0AVK6 867 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 MAN2B1O00754 1011 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 PLA2G5P39877 138 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 ACADSBP45954 432 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 FILIP1LQ4L180 1135 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 TADA2BQ86TJ2 420 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 PJA1Q8NG27 643 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 CLEC4CQ8WTT0 213 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 IRGQQ8WZA9 623 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
SRM-204ENST00000475189 CDK5RAP1Q96SZ6 601 aaKnown RBP17.02■□□□□ 0.32
SRM-204ENST00000475189 LHX5Q9H2C1 402 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 LTB4R2Q9NPC1 389 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 ST7Q9NRC1 585 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 DNMT3LQ9UJW3 386 aa17.02■□□□□ 0.32
SRM-204ENST00000475189 A0A1B0GTH6 734 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 FAM170BA6NMN3 283 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 SPECC1L-ADORA2AF8WAN1 911 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 SCAMP3O14828 347 aaKnown RBP17.01■□□□□ 0.31
SRM-204ENST00000475189 FBXO21O94952 628 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 IRF1P10914 325 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 CYP11B1P15538 503 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 CTHP32929 405 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 KRT9P35527 623 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 TPM4P67936 248 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 UBXN2BQ14CS0 331 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 BSPRYQ5W0U4 402 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 BTBD8Q5XKL5 378 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 TMEM110Q86TL2 294 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 RALGPS2Q86X27 583 aaPredicted RBP17.01■□□□□ 0.31
SRM-204ENST00000475189 PASD1Q8IV76 773 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 ZNF687Q8N1G0 1237 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
SRM-204ENST00000475189 FAM3CQ92520 227 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 ATP2A3Q93084 1043 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 MSANTD3Q96H12 275 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 OSBPL6Q9BZF3 934 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 MIS12Q9H081 205 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 ECT2Q9H8V3 914 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 SH3BP1Q9Y3L3 701 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 SIT1Q9Y3P8 196 aa17.01■□□□□ 0.31
SRM-204ENST00000475189 SLC9A3R1O14745 358 aaPredicted RBP17■□□□□ 0.31
SRM-204ENST00000475189 GREM1O60565 184 aa17■□□□□ 0.31
SRM-204ENST00000475189 GFPT2O94808 682 aa17■□□□□ 0.31
SRM-204ENST00000475189 SERPINC1P01008 464 aa17■□□□□ 0.31
SRM-204ENST00000475189 TARSP26639 723 aaKnown RBP17■□□□□ 0.31
SRM-204ENST00000475189 SOX5P35711 763 aa17■□□□□ 0.31
SRM-204ENST00000475189 FANCCQ00597 558 aa17■□□□□ 0.31
SRM-204ENST00000475189 EFEMP1Q12805 493 aa17■□□□□ 0.31
SRM-204ENST00000475189 PDCLQ13371 301 aa17■□□□□ 0.31
SRM-204ENST00000475189 NR1I3Q14994 352 aa17■□□□□ 0.31
SRM-204ENST00000475189 TXNDC11Q6PKC3 985 aa17■□□□□ 0.31
SRM-204ENST00000475189 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
SRM-204ENST00000475189 HTR3DQ70Z44 454 aa17■□□□□ 0.31
SRM-204ENST00000475189 RSRC2Q7L4I2 434 aaKnown RBP17■□□□□ 0.31
SRM-204ENST00000475189 NOP9Q86U38 636 aaKnown RBP17■□□□□ 0.31
SRM-204ENST00000475189 MIB1Q86YT6 1006 aa17■□□□□ 0.31
SRM-204ENST00000475189 SCUBE3Q8IX30 993 aa17■□□□□ 0.31
SRM-204ENST00000475189 CCDC105Q8IYK2 499 aa17■□□□□ 0.31
SRM-204ENST00000475189 ADGRG2Q8IZP9 1017 aa17■□□□□ 0.31
SRM-204ENST00000475189 CPA6Q8N4T0 437 aa17■□□□□ 0.31
SRM-204ENST00000475189 EDEM1Q92611 657 aa17■□□□□ 0.31
SRM-204ENST00000475189 CHFRQ96EP1 664 aa17■□□□□ 0.31
SRM-204ENST00000475189 SPAG5Q96R06 1193 aa17■□□□□ 0.31
SRM-204ENST00000475189 NELL2Q99435 816 aa17■□□□□ 0.31
SRM-204ENST00000475189 ABCC13Q9NSE7 274 aa17■□□□□ 0.31
SRM-204ENST00000475189 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
SRM-204ENST00000475189 TJP2Q9UDY2 1190 aa17■□□□□ 0.31
SRM-204ENST00000475189 RASAL2Q9UJF2 1139 aa17■□□□□ 0.31
SRM-204ENST00000475189 MRPS17Q9Y2R5 130 aaKnown RBP17■□□□□ 0.31
SRM-204ENST00000475189 E5RJQ4 531 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms