RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 TADA3O75528 432 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 GRAP2O75791 330 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 MTA2O94776 668 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 KRT3P12035 628 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 PTPN2P17706 415 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 CCR2P41597 374 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 YWHAGP61981 247 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 RPL7AP62424 266 aaKnown RBP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 YWHAZP63104 245 aaKnown RBP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 NTHL1P78549 312 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 OGDHQ02218 1023 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 CAMK2BQ13554 666 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 TAF12Q16514 161 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 FAM102AQ5T9C2 384 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 DNAJC24Q6P3W2 148 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 TMC5Q6UXY8 1006 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 BEND5Q7L4P6 421 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 GPR149Q86SP6 731 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 KIAA1328Q86T90 577 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 OVCA2Q8WZ82 227 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 MSLNLQ96KJ4 702 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 SLC2A13Q96QE2 648 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 CORO1BQ9BR76 489 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 SELENOOQ9BVL4 669 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 NUP85Q9BW27 656 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 TRIM7Q9C029 511 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 SFXN1Q9H9B4 322 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 OSGEPQ9NPF4 335 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 LUC7LQ9NQ29 371 aaKnown RBP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 METTL5Q9NRN9 209 aaKnown RBP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 KCND1Q9NSA2 647 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 CLIC5Q9NZA1 410 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 EHD2Q9NZN4 543 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 NAALADL1Q9UQQ1 740 aa10.49□□□□□ -0.73
COL8A1-206ENST00000474648 COL4A4P53420 1690 aaPredicted RBP10.49□□□□□ -0.73
COL8A1-206ENST00000474648 C2CD4BA6NLJ0 364 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 USP27XA6NNY8 438 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 SART1O43290 800 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 HSF2BPO75031 334 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 TBX10O75333 385 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 LTFP02788 710 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 RHOP08100 348 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 HOXB8P17481 243 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 FLT3P36888 993 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 PPP3CCP48454 512 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 HADHBP55084 474 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 RNASE9P60153 205 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 KIF5AQ12840 1032 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 CCDC14Q49A88 953 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 PRSS36Q5K4E3 855 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 RARS2Q5T160 578 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 SYPL2Q5VXT5 272 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 GRASPQ7Z6J2 395 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 DEFB106AQ8N104 65 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 CCAR2Q8N163 923 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 ELMOD1Q8N336 334 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 ARHGAP18Q8N392 663 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 C17orf53Q8N3J3 647 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 ZNF276Q8N554 614 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 EMC1Q8N766 993 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 SHKBP1Q8TBC3 707 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 RXFP2Q8WXD0 754 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 RFFLQ8WZ73 363 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 SMG7Q92540 1137 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 EDEM1Q92611 657 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 NT5C3BQ969T7 300 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 PABPC5Q96DU9 382 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 TCEAL4Q96EI5 215 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 BTBD6Q96KE9 485 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 DDX23Q9BUQ8 820 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 APOL5Q9BWW9 433 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 ADAM33Q9BZ11 813 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 POPDC2Q9HBU9 364 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 MRPL47Q9HD33 250 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 TLR8Q9NR97 1041 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 TRMT1Q9NXH9 659 aaKnown RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 CLDND1Q9NY35 253 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 TRPM5Q9NZQ8 1165 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 CTTNBP2NLQ9P2B4 639 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 UVRAGQ9P2Y5 699 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 UXTQ9UBK9 157 aaPredicted RBP10.48□□□□□ -0.73
COL8A1-206ENST00000474648 PAXBP1Q9Y5B6 917 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 SCINQ9Y6U3 715 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 SZT2Q5T011 3432 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 PLXNA3P51805 1871 aa10.48□□□□□ -0.73
COL8A1-206ENST00000474648 ATG2AQ2TAZ0 1938 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ZSCAN12O43309 604 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 DAB1O75553 588 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 TBX18O95935 607 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 MYL4P12829 197 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 RARGP13631 454 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 PDGFRAP16234 1089 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 GABRR2P28476 465 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 NOS2P35228 1153 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 MATKP42679 507 aa10.47□□□□□ -0.73
COL8A1-206ENST00000474648 ZNF143P52747 638 aaPredicted RBP10.47□□□□□ -0.73
COL8A1-206ENST00000474648 PITX1P78337 314 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms